Dihydrofolate reductase. 1H resonance assignments and coenzyme-induced conformational changes.
Lactobacillus casei dihydrofolate reductase has been studied in solution by one and two-dimensional 1H nuclear magnetic resonance (n.m.r.) spectroscopy at 500 MHz. By using a combination of n.m.r. methods in conjunction with the crystal structure of the enzyme-methotrexate-NADPH complex, resonances have been assigned for 32 of the 162 residues of the enzyme. These are widely distributed throughout the structure of the protein, and include all the histidine and tyrosine residues, as well as several valine, leucine, isoleucine and phenylalanine residues. The assignments have been made for the enzyme-methotrexate and enzyme-methotrexate-NADP+ complexes as well as the enzyme-methotrexate-NADPH complex. Comparison of assigned resonances in the spectra of the three complexes has permitted a preliminary assessment of structural differences between them. The beta-sheet "core" of the protein is unaffected by coenzyme binding, but two regions of the structure that undergo coenzyme-induced conformation changes have been identified. These are the loop comprising residues 13 to 23, and alpha-helix C (residues 42 to 49).
D000595:Amino Acid Sequence; D006639:Histidine; D007780:Lacticaseibacillus casei / Q000201:enzymology*; D009682:Magnetic Resonance Spectroscopy; D008958:Models, Molecular; D009249:NADP; D010649:Phenylalanine; D011487:Protein Conformation; D011522:Protons; D013762:Tetrahydrofolate Dehydrogenase; D014364:Tryptophan; D014443:Tyrosine
D011522:Protons; D014443:Tyrosine; D010649:Phenylalanine; D006639:Histidine; D009249:NADP; D014364:Tryptophan; D013762:Tetrahydrofolate Dehydrogenase