title: Pattern recognition analysis of in vivo enzyme-substrate fluorescence velocities in microorganism detection and identification.
abstract: A spectrometric technique is presented that combines most of the important criteria necessary for efficient detection and identification of microorganisms. These criteria include simplicity of experimental design, various degrees of sensitivity and selectivity, convenience, and total reaction times of less than 15 min. The study takes advantage of the inherent extracellular enzymes present in living as opposed to dead, non-enzyme-producing organisms. Sequentially these are harnessed in in vivo reactions with a substrate containing a select organic functional group that is known to be cleaved or hydrolyzed by a certain enzyme. The substrate is tailored so that one of the products can be induced to fluoresce, and by using a conventional spectrofluorimeter the rate at which the fluorescence appears can be recorded. By subjecting the same bacterial sample to a number of different enzyme substrates, a pattern of fluorescence response rates emerges from a 7 by 7 microorganism-substrate matrix. Detection limits ranged from 3.6 X 10(2) to 3.5 X 10(8) cells per ml for the Bacillus globigii-indoxyl acetate and Escherichia coli-diacetylfluorescein pairs, respectively. The specificity and versatility of the method for bacterial determination is demonstrated in probing different bacterial enzymes through their spectrally active metabolic products.
mesh_terms: D001407:Bacillus / Q000145:classification / Q000201:enzymology; D001412:Bacillus subtilis / Q000145:classification / Q000201:enzymology; D001419:Bacteria / Q000145:classification* / Q000201:enzymology; D004798:Enzymes / Q000378:metabolism*; D004926:Escherichia coli / Q000145:classification / Q000201:enzymology; D010363:Pattern Recognition, Automated; D011514:Proteus vulgaris / Q000145:classification / Q000201:enzymology; D011549:Pseudomonas / Q000145:classification / Q000201:enzymology; D012441:Saccharomyces cerevisiae / Q000145:classification / Q000201:enzymology; D012706:Serratia marcescens / Q000145:classification / Q000201:enzymology; D013050:Spectrometry, Fluorescence; D013379:Substrate Specificity
chemical_list: D004798:Enzymes