Comparison of Streptomyces griseus and bovine trypsin by active site analysis using fluorescent acyl groups.
The preparation of fluorescence labeled acyl enzymes (Streptomyces griseus trypsin) was successfully carried out using specific trypsin substrates, 'inverse substrates'. The topographical analysis of the structures of the area around the active site was carried out by measuring the fluorescence spectra of the acyl enzyme preparations and these results were compared with those of bovine trypsin. It was found that the polarity of the active site vicinity at pH 5 was similar to that of bovine trypsin, whereas considerable differences were noticed at lower pH as a result of pH-induced transformation. Conformational changes of the active site induced by the interaction with the specific ligand were analyzed from the fluorescence spectra. In these responses the two enzymes were quite distinguishable. The two enzymes active sites were also different in the energy transfer experiments. The spatial arrangements of the catalytic residues relative to the intrinsic tryptophan residues were suggested to be substantially different for the two enzymes.
D000345:Affinity Labels; D000818:Animals; D001665:Binding Sites; D002417:Cattle; D003619:Dansyl Compounds; D005456:Fluorescent Dyes; D006863:Hydrogen-Ion Concentration; D007700:Kinetics; D008958:Models, Molecular; D011487:Protein Conformation; D012995:Solubility; D013050:Spectrometry, Fluorescence; D013305:Streptomyces griseus / Q000201:enzymology*; D013379:Substrate Specificity; D014357:Trypsin / Q000378:metabolism*; D014364:Tryptophan
D000345:Affinity Labels; D003619:Dansyl Compounds; D005456:Fluorescent Dyes; D014364:Tryptophan; D014357:Trypsin