Efficient algorithms for molecular sequence analysis.
Efficient (linear time) algorithms are described for identifying global molecular sequence features allowing for errors including repeats, matches between sequences, dyad symmetry pairings, and other sequence patterns. A multiple sequence alignment algorithm is also described. Specific applications are given to hepatitis B viruses and the J5-C (J, joining; C, constant) region of the immunoglobulin kappa gene.
D000465:Algorithms; D000595:Amino Acid Sequence; D000818:Animals; D001483:Base Sequence; D005803:Genes, Immunoglobulin; D005814:Genes, Viral; D006518:Hepatitis Viruses / Q000235:genetics; D006801:Humans; D007145:Immunoglobulin kappa-Chains / Q000235:genetics; D051379:Mice; D011817:Rabbits; D012689:Sequence Homology, Nucleic Acid
D007145:Immunoglobulin kappa-Chains