New graphic representation of structural parameters of proteins.
A computer program is described that is designed to make the visual inspection of classical plots of protein properties (e.g. hydrophobicity, volume, etc.) as a function of sequence easier. An algorithm written in BASIC language has been used in order to generate a pseudo-tridimensional representation of the desired protein property. The data utilized by the program are arithmetic averages of the selected parameter obtained by using a five-residue window as a shuttle along the given amino acid sequence.
Facchiano
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F
Department of Chemistry and Biological Chemistry, First Faculty of Medicine, Naples, Italy.
Facchiano
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A
Facchiano
A
A
Ragone
R
R
Colonna
G
G
D000465:Algorithms; D000595:Amino Acid Sequence; D003196:Computer Graphics; D011487:Protein Conformation; D012984:Software