Chiral beta and random fractional deuteration for the determination of protein sidechain conformation by NMR.
Stereospecific assignments of the aspartic acid and asparagine beta-protons of the 108 residue protein E. coli thioredoxin have been obtained by the use of chiral deuteration. In addition protein samples have been prepared in which all carbon bound hydrogen positions are substituted to an extent of 75% with deuterium. These random fractionally deuterated samples significantly facilitate the measurement of coupling constants and intraresidue NOE intensities which combined with the stereospecific assignments have provided determination of the first sidechain dihedral angle chi 1 for all four asparagine residues and eight of the ten assigned aspartic acid residues.
LeMaster
D M
DM
Yale University, Department of Molecular Biophysics and Biochemistry, New Haven, CT 06511.
D001216:Asparagine; D001224:Aspartic Acid; D001426:Bacterial Proteins; D004926:Escherichia coli; D009682:Magnetic Resonance Spectroscopy / Q000379:methods*; D011487:Protein Conformation; D013237:Stereoisomerism; D013879:Thioredoxins
D001426:Bacterial Proteins; D001224:Aspartic Acid; D013879:Thioredoxins; D001216:Asparagine