title: Enzymatic properties of proteolytic derivatives of human alpha-thrombin.
abstract: The use of derivatives of alpha-thrombin obtained by limited proteolysis, that have only a single peptide bond cleaved, allowed the unequivocal correlation between the change in covalent structure and alteration of the enzymatic properties. beta T-Thrombin contains a single cleavage in the surface loop corresponding to residues 65-83 of alpha-chymotrypsin [Birktoft, J. J., & Blow, D. M. (1972) J. Mol. Biol. 68, 187-240]. Compared with alpha-thrombin, this modification had a minor effect on the following: (1) The Michaelis constant (Km) for two tripeptidyl p-nitroanilide substrates increased 2-3 fold, whereas the catalytic constant (k cat) remained unaltered. (2) A 2-3 fold increase in the binding constant (KI) of a tripeptidyl chloromethane inhibitor was observed, but the inactivation rate constant (k i) was the same, which indicated that the nucleophilicity of the active-site histidyl residue had not changed. (3) The second-order rate constant for the inhibition by antithrombin III decreased 2-fold. Heparin accelerated the inactivation, and the degree of acceleration was similar to that obtained with alpha-thrombin. Pronounced effects of the cleavage of this loop were found. (1) The cleavage of fibrinogen was approximately 80-fold slower than that with alpha-thrombin. This was mainly due to a 40-fold decrease in k cat. In contrast, only a 1.9-fold increase in the Michaelis constant was observed. (2) The affinity for thrombomodulin had decreased 39-fold compared to alpha-thrombin. epsilon-Thrombin contains a single cleaved peptide bond in the loop corresponding to residues 146-150 in alpha-chymotrypsin.(ABSTRACT TRUNCATED AT 250 WORDS)
authors: Friedrich Miescher Institut, Basel, Switzerland.
authors: J
authors: J
authors: Hofsteenge
authors: P J
authors: PJ
authors: Braun
authors: S R
authors: SR
authors: Stone
mesh_terms: D004795:Enzyme Stability; D006801:Humans; D007700:Kinetics; D010196:Pancreatic Elastase; D010446:Peptide Fragments / Q000378:metabolism; D011487:Protein Conformation; D013379:Substrate Specificity; D013917:Thrombin / Q000378:metabolism*; D014357:Trypsin; D014508:Urea / Q000494:pharmacology
chemical_list: D010446:Peptide Fragments; D014508:Urea; D010196:Pancreatic Elastase; D014357:Trypsin; D013917:Thrombin