Evidence from Fourier transform infrared spectroscopy for polarization of the carbonyl of oxaloacetate in the active site of citrate synthase.
The infrared spectrum of oxaloacetate bound in the active site of citrate synthase has been measured in the binary complex and in the ternary complex with the acetyl coenzyme A (CoA) enolate analogue carboxymethyl-CoA. The carbonyl stretching frequency of oxaloacetate in binary and ternary complexes is found at 1697 cm-1, a shift of 21 cm-1 to lower frequency relative to that of the free ligand. The line widths of the carbonyl absorption in enzyme complexes differ from that of the free ligand, decreasing from a value of 20 cm-1 for the free ligand to 10 cm-1 in the binary complex and 7 cm-1 in the ternary complex with carboxymethyl-CoA. The integrated absorbance of the carbonyl absorption in these enzyme complexes is significantly increased over that of the free ligand at the same concentration, increasing approximately 2-fold in the binary complex and approximately 3-fold in the ternary complex. These results indicate strong polarization of the carbonyl bond in the enzyme-substrate complexes and suggest that ground-state destabilization is a major catalytic strategy of citrate synthase.
D000105:Acetyl Coenzyme A / Q000378:metabolism; D001665:Binding Sites; D002950:Citrate (si)-Synthase / Q000378:metabolism*; D005583:Fourier Analysis; D009682:Magnetic Resonance Spectroscopy; D010071:Oxaloacetates / Q000378:metabolism*; D007652:Oxo-Acid-Lyases / Q000378:metabolism*; D011485:Protein Binding; D013055:Spectrophotometry, Infrared
D010071:Oxaloacetates; D000105:Acetyl Coenzyme A; D002950:Citrate (si)-Synthase; D007652:Oxo-Acid-Lyases