Complete nucleotide sequence of the Japanese encephalitis virus genome RNA.
The complete nucleotide sequence of the Japanese encephalitis virus (JEV) genome RNA was determined. The JEV genome contains 10,976 nucleotides and encodes a single long open reading frame (ORF) of 10,296 nucleotides corresponding to 3432 amino acid residues. This long polypeptide is thought to be cleaved into three structural proteins and several nonstructural proteins of the virus. The genetic location of the three structural proteins was determined by comparing the deduced amino acid sequence from the nucleotide sequence with the N-terminal amino acid sequences that were determined from the three purified structural proteins. The C-terminal region of the ORF may encode a RNA-dependent RNA polymerase which has significant sequence homology with those of other RNA viruses.
Department of Preventive Medicine, Nagasaki University, Japan.
H
H
Sumiyoshi
C
C
Mori
I
I
Fuke
K
K
Morita
S
S
Kuhara
J
J
Kondou
Y
Y
Kikuchi
H
H
Nagamatu
A
A
Igarashi
D000595:Amino Acid Sequence; D001483:Base Sequence; D003062:Codon; D004247:DNA / Q000235:genetics; D004664:Encephalitis Virus, Japanese / Q000235:genetics*; D005796:Genes; D005814:Genes, Viral; D008969:Molecular Sequence Data; D009690:Nucleic Acid Conformation; D011487:Protein Conformation; D011498:Protein Precursors / Q000235:genetics; D012367:RNA, Viral / Q000235:genetics*; D012689:Sequence Homology, Nucleic Acid; D014764:Viral Proteins / Q000235:genetics*
D003062:Codon; D011498:Protein Precursors; D012367:RNA, Viral; D014764:Viral Proteins; D004247:DNA