title: The bhopalator: a molecular model of the living cell based on the concepts of conformons and dissipative structures.
abstract: A molecular model of the living cell has been formulated based on a new theory of enzymic catalysis which takes into account the complementary roles of free energy and genetic information. The elementary units of free energy and genetic information that are necessary and sufficient for effectuating molecular mechanisms responsible for the life of the cell are called conformons. Conformons are visualized as a collection of a small number of catalytic residues of enzymes or segments of nucleic acids that are arranged in space and time with appropriate force vectors so as to cause chemical transformations or physical changes of a substrate or a bound ligand. So defined, conformons provide a plausible molecular means to link the genetic information stored in DNA and its ultimate expression, namely networks of coupled intracellular biochemical reactions and physical processes maintained by a continuous dissipation of free energy--dissipative structures of Prigogine. The proposed model of the living cell appears to possess the potential for bridging the gap between molecular biology and the biology of multicellular systems.
mesh_terms: D001665:Binding Sites; D001692:Biological Transport; D002384:Catalysis; D002477:Cells; D003201:Computers; D004798:Enzymes; D005815:Genetic Code; D007700:Kinetics; D008954:Models, Biological; D009711:Nucleotides; D011487:Protein Conformation; D013816:Thermodynamics
chemical_list: D004798:Enzymes; D009711:Nucleotides