Studies on chemical modification of thionucleosides in the transfer ribonucleic acid of Escherichia coli.
(35)S-labelled tRNA from Escherichia coli was treated with chemical reagents such as CNBr, H(2)O(2), NH(2)OH, I(2), HNO(2), KMnO(4) and NaIO(4), under mild conditions where the four major bases were not affected. Gel filtration of the treated tRNA showed desulphurization to various extents, depending on the nature of the reagent. The treated samples after conversion into nucleosides were chromatographed on a phosphocellulose column. NH(2)OH, I(2) and NaIO(4) reacted with all the four thionucleosides of E. coli tRNA, 4-thiouridine (s(4)U), 5-methylaminomethyl-2-thiouridine (mnm(5)s(2)U), 2-thiocytidine (s(2)C) and 2-methylthio-N(6)-isopentenyladenosine (ms(2)i(6)A), to various extents. CNBr, HNO(2) and NaHSO(3) reacted with s(4)U, mnm(5)s(2)U and s(2)C, but not with ms(2)i(6)A. KMnO(4) and H(2)O(2) were also found to react extensively with thionucleosides in tRNA. Iodine oxidation of (35)S-labelled tRNA showed that only 6% of the sulphur was involved in disulphide formation. Desulphurization of E. coli tRNA with CNBr resulted in marked loss of acceptor activities for glutamic acid, glutamine and lysine. Acceptor activities for alanine, arginine, glycine, isoleucine, methionine, phenylalanine, serine, tyrosine and valine were also affected, but to a lesser extent. Five other amino acids tested were almost unaffected. These results indicate the fate of thionucleosides in tRNA when subjected to various chemical reactions and the involvement of sulphur in aminoacyl-tRNA synthetase recognition of some tRNA species of E. coli.
D002850:Chromatography, Gel; D003488:Cyanogen Bromide; D003562:Cytidine; D004926:Escherichia coli / Q000032:analysis; D006861:Hydrogen Peroxide; D006898:Hydroxylamines; D009608:Nitrous Acid; D009705:Nucleosides; D010084:Oxidation-Reduction; D010504:Periodic Acid; D011196:Potassium Permanganate; D012343:RNA, Transfer / Q000302:isolation & purification; D012436:S-Adenosylmethionine; D013440:Sulfides / Q000032:analysis; D013447:Sulfites; D013462:Sulfur Radioisotopes; D013891:Thiouridine
D006898:Hydroxylamines; D009705:Nucleosides; D013440:Sulfides; D013447:Sulfites; D013462:Sulfur Radioisotopes; D011196:Potassium Permanganate; D010504:Periodic Acid; D013891:Thiouridine; D003562:Cytidine; D012436:S-Adenosylmethionine; D012343:RNA, Transfer; D006861:Hydrogen Peroxide; D003488:Cyanogen Bromide; D009608:Nitrous Acid