Penetration of dioxygen into proteins studied by quenching of phosphorescence and fluorescence.
Experiments were done to measure the ability of dioxygen to collisionally quench the phosphorescent and fluorescent tryptophans in alcohol dehydrogenase and alkaline phosphatase. In all cases, luminescence is quenched with rate constants close to 1 x 10(9) M-1 s-1. The rate of reaching the buried tryptophans is little affected by solvent viscosity due to added glycerol. Quenching by dioxygen is not due to a protein-opening reaction. It appears to be rate limited by internal protein diffusion rather than at the entry step. Dioxygen appears to enter the proteins directly, as in liquidlike diffusion, rather than through transiently forming channels that are only present a small fraction of the time. A high-pressure oxygen system is described that considerably facilitates fluorescence quenching experiments.
D000426:Alcohol Dehydrogenase; D000429:Alcohol Oxidoreductases / Q000378:metabolism*; D000469:Alkaline Phosphatase / Q000378:metabolism*; D000818:Animals; D004926:Escherichia coli / Q000201:enzymology; D005453:Fluorescence; D006736:Horses; D008099:Liver / Q000201:enzymology; D008163:Luminescent Measurements; D008433:Mathematics; D010100:Oxygen / Q000378:metabolism*; D014364:Tryptophan / Q000378:metabolism
D014364:Tryptophan; D000429:Alcohol Oxidoreductases; D000426:Alcohol Dehydrogenase; D000469:Alkaline Phosphatase; D010100:Oxygen