Prediction of packing of secondary structure.
An improved method of picking up candidates for predicting the packing arrangement of beta-strands and alpha-helices of the alpha/beta type domains is described here. The method of judging whether the region of the protein would fold into the alpha/beta type or not is also described. The folding constraints of globular proteins are analysed and presented in this article for application to the prediction of packing of secondary structure. The analysis of the residue-fluctuations is also applicable for the purpose.
D001089:Arabinose / Q000378:metabolism; D002352:Carrier Proteins / Q000378:metabolism; D029968:Escherichia coli Proteins; D046911:Macromolecular Substances; D008433:Mathematics; D008958:Models, Molecular; D011487:Protein Conformation; D011506:Proteins / Q000378:metabolism*; D013329:Structure-Activity Relationship; D014961:X-Ray Diffraction
C016242:AraF protein, E coli; D002352:Carrier Proteins; D029968:Escherichia coli Proteins; D046911:Macromolecular Substances; D011506:Proteins; D001089:Arabinose