Aminoacyl-nucleotide reactions: studies related to the origin of the genetic code and protein synthesis.
In the present paper, we report on the effect of pH and carbonate on the hydrolysis rate constants of N-blocked and free aminoacyl adenylate anhydrides. Whereas the hydrolysis of free aminoacyl adenylates seems principally catalyzed by OH-, the hydrolysis of the N-blocked species is also catalyzed by H+, giving this compound a U-shaped hydrolysis vs. pH curve. Furthermore, at pH's less than 8, carbonate has an extreme catalytic effect on the hydrolysis of free aminoacyl-AMP anhydride, but essentially no effect on the hydrolysis of N-blocked aminoacyl-AMP anhydride. Furthermore, the N-blocked aminoacyl-AMP anhydride is a very efficient generator of peptides using free glycine as acceptor. The possible significance of the observations to prebiological peptide synthesis is discussed.
D000249:Adenosine Monophosphate / Q000031:analogs & derivatives*; D049148:Aminoacylation; D005815:Genetic Code; D006863:Hydrogen-Ion Concentration; D007700:Kinetics; D014176:Protein Biosynthesis
C042022:phenylalanyl-AMP anhydride; D000249:Adenosine Monophosphate