Computer programs used to aid in the selection of DNA hybridization probes.
This paper describes a package of three programs which used together aid in selecting the best possible sequence to be used as a DNA hybridization probe. This system searches an amino acid sequence for four adjacent amino acids with the fewest possible corresponding mRNA sequences, calculates their probability of occurrence, and locates the positions of wobbles and mismatches between the DNA hybridization probe and the possible mRNA sequences.
D001483:Base Sequence; D003201:Computers; D004247:DNA / Q000235:genetics*; D008722:Methods; D008838:Microcomputers; D009693:Nucleic Acid Hybridization; D012333:RNA, Messenger / Q000235:genetics; D012984:Software
D012333:RNA, Messenger; D004247:DNA