Structural studies on heparin. Tetrasaccharides obtained by heparinase degradation.
Three tetrasaccharides representing major structural sequences of heparin were isolated in good yield and characterized after degradation of heparin by purified flavobacterial heparinase. N-Desulfation was necessary to achieve good separation of these closely related compounds from each other. One of the tetrasaccharides was shown to be derived from the fully sulfated repeating segments; to contain L-iduronic acid and six sulfate groups, and have the structure delta 4,5- HexpA -(2-SO4)-(1----4)-alpha-D- GlcpN -(N-SO4)-(6-SO4)-(1- ---4)-alpha -L- IdopA -(2-SO4)-(1----4)-D- GlcN -(N-SO4)-(6-SO4). The second contained a D-glucuronic acid unit that was nonsulfated instead of the L-iduronic acid, and the third, obtained in a fairly low yield, contained five sulfate groups, three of which being located on the disaccharide at the nonreducing end, and having the structure delta 4,5- HexpA -(2-SO4)-(1----4)-alpha-D- GlcpN -(N-SO4)-(6-SO4)-(1- ---4)-alpha -L- IdopA -(2-SO4)-(1----4)-D- GlcN -(N-SO4). All tetrasaccharides had a sulfated, unsaturated uronic acid unit at the nonreducing end, confirming that the heparinase requires sulfated L-iduronic acid units for activity.
D002240:Carbohydrate Sequence; D005417:Flavobacterium / Q000201:enzymology; D006493:Heparin; D019763:Heparin Lyase; D009682:Magnetic Resonance Spectroscopy; D009844:Oligosaccharides; D011133:Polysaccharide-Lyases / Q000378:metabolism*; D013379:Substrate Specificity
D009844:Oligosaccharides; D006493:Heparin; D011133:Polysaccharide-Lyases; D019763:Heparin Lyase