title: Protoporphyrin formation in Rhizobium japonicum.
abstract: The obligately aerobic soybean root nodule bacterium Rhizobium japonicum produces large amounts of heme (iron protoporphyrin) only under low oxygen tensions, such as exist in the symbiotic root nodule. Aerobically incubated suspensions of both laboratory-cultured and symbiotic bacteria (bacteroids) metabolize delta-aminolevulinic acid to uroporphyrin, coproporphyrin, and protoporphyrin. Under anaerobic conditions, suspensions of laboratory-cultured bacteria form greatly reduced amounts of protoporphyrin from delta-aminolevulinic acid, whereas protoporphyrin formation by bacteroid suspensions is unaffected by anaerobiosis, suggesting that bacteroids form protoporphyrin under anaerobic conditions more readily than do free-living bacteria. Oxygen is the major terminal electron acceptor for coproporphyrinogen oxidation in cell-free extracts of both bacteroids and free-living bacteria. In the absence of oxygen, ATP, NADP, Mg2+, and L-methionine are required for protoporphyrin formation in vitro. In the presence of these supplements, coproporphyrinogenase activity under anaerobic conditions is 5 to 10% of that observed under aerobic conditions. Two mechanisms for coproporphyrinogen oxidation exist in R. japonicum: an oxygen-dependent process and an anaerobic oxidation in which electrons are transferred to NADP. The significance of these findings with regard to heme biosynthesis in the microaerophilic soybean root nodule is discussed.
mesh_terms: D000332:Aerobiosis; D000622:Aminolevulinic Acid / Q000378:metabolism; D000693:Anaerobiosis; D003304:Coproporphyrinogen Oxidase / Q000378:metabolism; D003305:Coproporphyrinogens / Q000378:metabolism; D003306:Coproporphyrins / Q000096:biosynthesis; D011162:Porphobilinogen / Q000096:biosynthesis; D011166:Porphyrins / Q000096:biosynthesis*; D011524:Protoporphyrins / Q000096:biosynthesis*; D012231:Rhizobium / Q000378:metabolism*; D014578:Uroporphyrins / Q000096:biosynthesis
chemical_list: D003305:Coproporphyrinogens; D003306:Coproporphyrins; D011166:Porphyrins; D011524:Protoporphyrins; D014578:Uroporphyrins; D011162:Porphobilinogen; D000622:Aminolevulinic Acid; D003304:Coproporphyrinogen Oxidase