Coenzyme binding site of glutamate decarboxylase.
Dissociation constants have been measured for the binding of a variety of simple analogues of pyridoxal 5'-phosphate to apoglutamate decarboxylase. Compounds studied have a simple alkyl or aryl group and a negatively charged substituent (phosphate, phosphonate, phosphoramidate, sulfate, sulfonate, or carboxylate). Optimum binding to the phosphate binding site of the enzyme is achieved by compounds having a double negative charge and a tetrahedral geometry. Planar anions and monoanions bind considerably less well. These and previous data are used to to derive the magnitudes of the contributions of various coenzyme functional groups to the strength of the apoenzyme-coenzyme interaction.
D001665:Binding Sites; D002262:Carboxy-Lyases / Q000378:metabolism*; D004926:Escherichia coli / Q000201:enzymology; D005968:Glutamate Decarboxylase / Q000378:metabolism*; D006863:Hydrogen-Ion Concentration; D007700:Kinetics; D011485:Protein Binding; D011732:Pyridoxal Phosphate / Q000031:analogs & derivatives*; D013050:Spectrometry, Fluorescence; D013056:Spectrophotometry, Ultraviolet; D013329:Structure-Activity Relationship
D011732:Pyridoxal Phosphate; D002262:Carboxy-Lyases; D005968:Glutamate Decarboxylase