title: The double pi pi 5.6 helix of gramicidin A predominates in unsaturated lipid membranes.
abstract: The structure of the channel-forming polypeptide gramicidin A (GA) incorporated into phosphatidyl-choline (PC) liposomes has been studied as a function of the degree of unsaturation of the acyl chains of PC. The initial conformational state of GA in reconstituted bilayers is determined by the solvent in which the peptide and the lipid are initially co-dissolved, whereas the equilibrium conformational state (after heat incubation) is affected by the lipid structure rather than by the nature of the solvent. The conformational equilibrium of GA has been studied in liposomes prepared from PC having a variable number of double bonds in the fatty acid moiety, by circular dichroism and Fourier transform infrared. Liposomes were prepared from trifluoroethanol or ethanol solutions and incubated at 68 degrees C. GA was shown to retain the conformation of the right-handed pi-->6.3 pi<--6.3 helix in PC with saturated acyl chains and with one double bond, whereas in dilinoleoyl-PC, having two double bond in each chain, the thermodynamically preferred structures are left-handed antiparallel and parallel double pi pi 5.6 helices. Natural soybean PC also favours left-handed pi pi 5.6 helical structures of GA (approximately 75%). This finding is discussed in terms of the role of PC unsaturation in the dynamic properties of the lipid matrix. Differences between observed FTIR spectra of the increases decreases pi pi 5.6 helix in solution (and to a larger extent in the membrane) and the calculated IR spectra can be interpreted as resulting from deviation of the real structure from the theoretically derived ideal helix. The data obtained provide grounds for better understanding of a GA channel functioning in lipids of variable degrees of unsaturation.
authors.affiliation: Shemyakin Institute of Bioorganic Chemistry, Russian Academy of Sciences, Moscow.
authors.forename: S V
authors.initials: SV
authors.lastname: Sychev
authors.forename: L I
authors.initials: LI
authors.lastname: Barsukov
authors.forename: V T
authors.initials: VT
authors.lastname: Ivanov
mesh_terms: D002586:Cesium / Q000494:pharmacology; D002942:Circular Dichroism; D006096:Gramicidin / Q000737:chemistry*; D007700:Kinetics; D008081:Liposomes / Q000737:chemistry; D008563:Membrane Lipids / Q000737:chemistry*; D008823:Micelles; D010713:Phosphatidylcholines / Q000737:chemistry; D011188:Potassium / Q000494:pharmacology; D017433:Protein Structure, Secondary; D012964:Sodium / Q000494:pharmacology; D017550:Spectroscopy, Fourier Transform Infrared; D013816:Thermodynamics
chemical_list: D008081:Liposomes; D008563:Membrane Lipids; D008823:Micelles; D010713:Phosphatidylcholines; D006096:Gramicidin; D002586:Cesium; D012964:Sodium; D011188:Potassium