title: HIV-1 reverse transcription. A termination step at the center of the genome.
abstract: During HIV-1 reverse transcription, the plus-strand of viral DNA is synthesized as two discrete segments. We show here that synthesis of the upstream segment terminates at the center of the genome after an 88 or 98 nucleotide strand displacement of the downstream segment, initiated at the central polypurine tract. Thus, the final structure of unintegrated linear HIV-1 DNA includes a central plus-strand overlap. In vitro reconstitution using only purified reverse transcriptase with appropriate DNA hybrids gave rise to efficient and accurate termination, which was dramatically amplified in the context of strand displacement. Mutation of the sequence immediately upstream of the termination sites almost completely abolished termination both in infected cells and in vitro. This mutation profoundly impaired replication of HIV-1. We conclude that proper central plus-strand termination, mediated by a novel cis-active termination sequence, is a key step in HIV-1 replication.
authors.affiliation: Unité d'Oncologie Virale, CNRS URA 1157, Institut Pasteur, Paris, France.
authors.forename: P
authors.initials: P
authors.lastname: Charneau
authors.forename: G
authors.initials: G
authors.lastname: Mirambeau
authors.forename: P
authors.initials: P
authors.lastname: Roux
authors.forename: S
authors.initials: S
authors.lastname: Paulous
authors.forename: H
authors.initials: H
authors.lastname: Buc
authors.forename: F
authors.initials: F
authors.lastname: Clavel
mesh_terms: D001483:Base Sequence; D002461:Cell Line, Transformed; D017124:Conserved Sequence; D004279:DNA, Viral / Q000096:biosynthesis; D054303:HIV Reverse Transcriptase; D015497:HIV-1 / Q000235:genetics*; D006801:Humans; D008957:Models, Genetic; D008969:Molecular Sequence Data; D016297:Mutagenesis, Site-Directed; D012367:RNA, Viral / Q000235:genetics*; D012194:RNA-Directed DNA Polymerase / Q000378:metabolism*; D017422:Sequence Analysis, DNA; D013728:Terminator Regions, Genetic / Q000235:genetics*; D014158:Transcription, Genetic / Q000502:physiology*; D014779:Virus Replication / Q000502:physiology
chemical_list: D004279:DNA, Viral; D012367:RNA, Viral; D054303:HIV Reverse Transcriptase; D012194:RNA-Directed DNA Polymerase