title: Reversing the effect of formalin on the binding of propidium iodide to DNA.
abstract: Formalin, an excellent preservative of cellular morphology, is a commonly used fixative for tissue specimens in hospital pathology laboratories. This preserved material is a potential source of tissue for diagnostic and retrospective research studies on DNA using flow cytometry. Unfortunately, formalin interferes with the binding of propidium iodide (PI) and other fluorescent dyes to DNA, thus altering the measurement of DNA content by flow cytometry or image analysis. This interference has been attributed to the cross-linking of histones by formalin. Since formalin alters the measurement of DNA content in formalin-fixed and formalin-fixed, paraffin-embedded tissues, this study was designed to explore the use of various physicochemical methods to reverse the effect of the formalin on the binding of PI to DNA. This study demonstrates that resuspending formalin-fixed cells in PBS and heating them at 75 degrees C for at least 1 h prior to staining with PI restores the staining of the DNA to approximately the same fluorescence intensity as that of fresh tissue.
authors.affiliation: Department of Pediatrics, Cooper Hospital/UMC, Camden, New Jersey 08103.
authors.forename: W R
authors.initials: WR
authors.lastname: Overton
authors.forename: J P
authors.initials: JP
authors.lastname: McCoy
mesh_terms: D016477:Artifacts; D002021:Buffers; D002843:Chromatin / Q000187:drug effects; D003432:Cross-Linking Reagents / Q000494:pharmacology; D004247:DNA / Q000032:analysis / Q000378:metabolism*; D005434:Flow Cytometry; D005557:Formaldehyde / Q000494:pharmacology*; D006657:Histones / Q000187:drug effects; D006358:Hot Temperature; D006801:Humans; D007364:Intercalating Agents / Q000378:metabolism*; D016612:Paraffin Embedding; D010710:Phosphates; D011419:Propidium / Q000378:metabolism*; D012965:Sodium Chloride; D013194:Staining and Labeling; D016707:Tissue Fixation
chemical_list: D002021:Buffers; D002843:Chromatin; D003432:Cross-Linking Reagents; D006657:Histones; D007364:Intercalating Agents; D010710:Phosphates; D005557:Formaldehyde; D011419:Propidium; D012965:Sodium Chloride; D004247:DNA