title: Use of the polymerase chain reaction to identify coding sequences for chitin synthase isozymes in Phialophora verrucosa.
abstract: Based on conserved amino-acid regions predicted for the chitin synthases (Chs) of Saccharomyces cerevisiae, two different primer sets were synthesized and used in polymerase chain reactions (PCRs) to amplify 614-bp and 366-bp sequences from genomic DNA of the zoopathogenic fungus Phialophora verrucosa. DNA-sequencing and Southern-blotting analyses of the 614-bp DNA amplification products suggested that portions of two distinct P. verrucosa chitin synthase genes (PvCHS1, PvCHS2), coding for two different zymogenic-type PvChs isozymes, had been identified. The deduced amino-acid sequence of each fell into different Chs classes, namely class I and class II. In addition, the 366-bp DNA segment was shown to code for a conserved region having homology with the CSD2/CAL1 gene of S. cerevisiae, which encodes a nonzymogenic-type enzyme, Chs3, in that fungus. The amino-acid sequence derived from PvCHS3 exhibits 88.2% similarity and 78.4% identity to the same amino-acid region of the S. cerevisiae enzyme. These results provide a critical first step toward investigating the molecular and pathogenic importance of CHS gene regulation in this fungus and for exploring steps leading to Chs function as potential targets for the design of new therapeutic agents.
authors.affiliation: Department of Microbiology, University of Texas at Austin 78712-1095, USA.
authors.forename: M
authors.initials: M
authors.lastname: Peng
authors.forename: S M
authors.initials: SM
authors.lastname: Karuppayil
authors.forename: L
authors.initials: L
authors.lastname: Mendoza
authors.forename: T A
authors.initials: TA
authors.lastname: Levins
authors.forename: P J
authors.initials: PJ
authors.lastname: Szaniszlo
mesh_terms: D000595:Amino Acid Sequence; D001483:Base Sequence; D002687:Chitin Synthase / Q000235:genetics*; D017124:Conserved Sequence; D017931:DNA Primers / Q000235:genetics; D004271:DNA, Fungal / Q000235:genetics; D005800:Genes, Fungal; D007527:Isoenzymes / Q000235:genetics*; D008969:Molecular Sequence Data; D010676:Phialophora / Q000201:enzymology* / Q000235:genetics*; D016133:Polymerase Chain Reaction / Q000379:methods*; D012441:Saccharomyces cerevisiae / Q000201:enzymology / Q000235:genetics; D013045:Species Specificity
chemical_list: D017931:DNA Primers; D004271:DNA, Fungal; D007527:Isoenzymes; D002687:Chitin Synthase