title: Influence of obstacles on lipid lateral diffusion: computer simulation of FRAP experiments and application to proteoliposomes and biomembranes.
abstract: Fluorescence Recovery After Photobleaching experiments were simulated using a computer approach in which a membrane lipid leaflet was mimicked using a triangular lattice obstructed with randomly distributed immobile and non-overlapping circular obstacles. Influence of the radius r and area fraction c of these obstacles and of the radius R of the observation area on the relative diffusion coefficient D* (Eq. (1)) and mobile fraction M was analyzed. A phenomenological equation relating D* to r and c was established. Fitting this equation to the FRAP data we obtained with the probe NBD-PC embedded in bacteriorhodopsin/egg-PC multilayers suggests that this transmembrane protein rigidifies the surrounding lipid phase over a distance of about 18 A (approximately equal to two lipid layers) from the protein surface. In contrast, analysis of published diffusion constants obtained for lipids in the presence of gramicidin suggests that in terms of lateral diffusion, this relatively small polypeptide does not significantly affect the surrounding lipid phase. With respect to the mobile fraction M, and for point obstacles above the percolation threshold, an increase in R led to a decrease in M which can be associated with the existence of closed domains whose average size and diffusion properties can be determined. Adaptation of this model to the re-interpretation of the FRAP data obtained by Yechiel and Edidin (J Cell Biol (1987) 115:755-760) for the plasma membrane of human fibroblasts consistently leads to the suggestion that the lateral organization of this membrane would be of the confined type, with closed lipid domains of approximately equal to 0.5 microns 2 in area.
authors.affiliation: Laboratoire de Pharmacologie et Toxicologie Fondamentales du CNRS (Département III), Toulouse, France.
authors.forename: V
authors.initials: V
authors.lastname: Schram
authors.forename: J F
authors.initials: JF
authors.lastname: Tocanne
authors.forename: A
authors.initials: A
authors.lastname: Lopez
mesh_terms: D001436:Bacteriorhodopsins / Q000737:chemistry*; D002462:Cell Membrane / Q000737:chemistry / Q000648:ultrastructure; D003198:Computer Simulation; D004058:Diffusion; D005347:Fibroblasts / Q000648:ultrastructure; D006096:Gramicidin; D006801:Humans; D008051:Lipid Bilayers / Q000737:chemistry*; D008566:Membranes / Q000737:chemistry / Q000648:ultrastructure; D008968:Molecular Conformation; D010713:Phosphatidylcholines / Q000737:chemistry*; D010777:Photochemistry; D011510:Proteolipids / Q000737:chemistry*; D013050:Spectrometry, Fluorescence / Q000379:methods
chemical_list: D008051:Lipid Bilayers; D010713:Phosphatidylcholines; D011510:Proteolipids; C020485:proteoliposomes; D006096:Gramicidin; D001436:Bacteriorhodopsins