Relation between protein structure, sequence homology and composition of amino acids.
A method of quantitative comparison of two classifications rules applied to protein folding problem is presented. Classification of proteins based on sequence homology and based on amino acid composition were compared and analyzed according to this approach. The coefficient of correlation between these classification methods and the procedure of estimation of robustness of the coefficient are discussed.
Mayoraz
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RUTCOR-Rutgers University's Center for Operations Research, New Brunswick, NJ 08903-5062, USA.
Dubchak
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Muchnik
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I
D000595:Amino Acid Sequence; D000596:Amino Acids / Q000032:analysis*; D016208:Databases, Factual; D008969:Molecular Sequence Data; D011487:Protein Conformation; D017510:Protein Folding; D011506:Proteins / Q000737:chemistry*; D017386:Sequence Homology, Amino Acid; D012984:Software
D000596:Amino Acids; D011506:Proteins