title: Chromosome-9 loss detected by fluorescence in situ hybridization in bladder cancer.
abstract: A loss of chromosome-9 material is one of the most frequent genomic aberrations known in bladder cancer. In order to better understand the role of chromosome-9 losses in bladder cancer, 125 formalin-fixed and 37 unfixed bladder tumors were examined using fluorescence in situ hybridization (FISH). A repetitive probe for a pericentromeric region on 9q12 (pHUR98) was applied for chromosome-9 copy-number enumeration. Under-representation of chromosome 9 was found in 74 of 162 cases. There was no association between loss of chromosome 9 and increased grade or stage, papillary growth pattern, p53 protein expression, or tumor-cell proliferation (Ki-67). These data show that chromosome-9 loss is an early event in bladder-cancer development, occurring independently of p53 alterations. In order to determine the prevalence of large sub-regional chromosome-9 deletions, dual hybridizations with pHUR98 and cosmid probes for 9q34, 9q22, and 9p21 were performed. Partial deletion was detected in only 1 of 36 cases for 9q34 and in 1 of 24 cases for 9p21. Surprisingly, amplification of the interferon alpha locus on 9p21 was seen in 1 of 24 tumors. The finding of 9p amplification may indicate the site of an oncogene relevant for bladder cancer.
authors.affiliation: Institute of Pathology, University of Basel, Switzerland.
authors.forename: G
authors.initials: G
authors.lastname: Sauter
authors.forename: H
authors.initials: H
authors.lastname: Moch
authors.forename: P
authors.initials: P
authors.lastname: Carroll
authors.forename: R
authors.initials: R
authors.lastname: Kerschmann
authors.forename: M J
authors.initials: MJ
authors.lastname: Mihatsch
authors.forename: F M
authors.initials: FM
authors.lastname: Waldman
mesh_terms: D002872:Chromosome Deletion; D002899:Chromosomes, Human, Pair 9 / Q000235:genetics*; D015342:DNA Probes; D006801:Humans; D007150:Immunohistochemistry; D017404:In Situ Hybridization, Fluorescence; D010641:Phenotype; D016159:Tumor Suppressor Protein p53 / Q000032:analysis; D001749:Urinary Bladder Neoplasms / Q000737:chemistry / Q000235:genetics*
chemical_list: D015342:DNA Probes; D016159:Tumor Suppressor Protein p53