title: GC-MS analysis of nonprotein amino acids in Gymnocladus dioicus as N(O,S)-isobutyloxycarbonyl silyl derivatives.
abstract: Two different derivatives of novel nonprotein amino acids in Gymnocladus dioicus seeds are prepared for gas chromatographic (GC) and mass spectrometric (MS) analysis. The interfering components in a water extract of the seeds are removed by picric acid treatment and multistep washing with organic solvents followed by N(O,S)-isobutyloxycarbonylation combined with solid-phase extraction. The resulting N(O,S)-isobutyloxycarbonyl (isoBOC) amino acids are then converted to either tert-butyldimethylsilyl (TBDMS) or trimethylsilyl (TMS) derivatives, which are analyzed by dual capillary column GC and GC-MS. The characteristic ions in the mass spectra of N(O,S)-isoBOC TBDMS and N(O,S)-isoBOC TMS derivatives enable confirmation of molecular weight and existence of functional groups containing active protons. Temperature programmed retention index sets measured on DB-5 and DB-17 capillary columns (J&W Scientific; Folsom, CA) are useful for distinguishing among structural isomers. gamma-Methylglutamic acid, diastereoisomers of 3-hydroxy-4-methylglutamic acid, cis and trans isomers of 5-hydroxypipecolic acid, and some free protein amino acids are identified in Gymnocladus dioicus seeds.
authors.affiliation: Department of Botany, University of Texas at Austin 78713-7640, USA.
authors.forename: C H
authors.initials: CH
authors.lastname: Oh
authors.forename: T J
authors.initials: TJ
authors.lastname: Mabry
authors.forename: K R
authors.initials: KR
authors.lastname: Kim
authors.forename: J H
authors.initials: JH
authors.lastname: Kim
mesh_terms: D000596:Amino Acids / Q000032:analysis*; D008401:Gas Chromatography-Mass Spectrometry / Q000379:methods*; D012639:Seeds / Q000737:chemistry; D012821:Silanes / Q000737:chemistry*; D014197:Trees / Q000737:chemistry*
chemical_list: D000596:Amino Acids; D012821:Silanes