title: Evidence for a site-specific cytidine deamination reaction involved in C to U RNA editing of plant mitochondria.
abstract: Transcripts of higher plant mitochondria are modified post-transcriptionally by RNA editing. To distinguish between the mechanisms by which the cytidine to uridine transition could occur a combined transcription/RNA editing assay and an in vitro RNA editing system were investigated. Mitochondria isolated from etiolated pea seedlings and potato tubers were supplied with [alpha-32P]CTP to radiolabel the mitochondrial run-on transcripts. High molecular weight run-on transcripts were isolated and hydrolyzed, and nucleotide identities were analyzed by one- and two-dimensional thin layer chromatography. The amount of label comigrating with UMP nucleotides increases with extended incubation times. Analogous products were obtained by incubation of [alpha-32P]CTP or [5-3H]CTP radiolabeled in vitro transcripts with a mitochondrial lysate from pea mitochondria. 5-3H label of the cytosine base was detected in the UMP spot after incubation of in vitro transcripts with mitochondrial lysate. These results are consistent with a deamination reaction involved in this post-transcriptional C to U modification process. To prove that cytidines are deaminated specifically in vitro transcripts were reisolated after incubation and analyzed by reverse transcription-polymerase chain reaction. Sequence analysis clearly shows that only cytidines at editing sites are edited while residual cytidines are not modified and suggests that site-specific factors are involved in RNA editing of plant mitochondria.
authors.affiliation: Institut für Genbiologische Forschung Berlin GmbH, Federal Republic of Germany.
authors.forename: W
authors.initials: W
authors.lastname: Yu
authors.forename: W
authors.initials: W
authors.lastname: Schuster
mesh_terms: D001483:Base Sequence; D002474:Cell-Free System; D003562:Cytidine / Q000378:metabolism*; D003568:Cytidine Monophosphate / Q000378:metabolism; D003641:Deamination; D008928:Mitochondria / Q000235:genetics*; D008969:Molecular Sequence Data; D018532:Pisum sativum / Q000235:genetics; D017393:RNA Editing; D012333:RNA, Messenger / Q000378:metabolism; D011198:Solanum tuberosum / Q000235:genetics; D013347:Subcellular Fractions / Q000378:metabolism; D014158:Transcription, Genetic; D014542:Uridine Monophosphate / Q000096:biosynthesis; D014675:Vegetables / Q000235:genetics*
chemical_list: D012333:RNA, Messenger; D003562:Cytidine; D014542:Uridine Monophosphate; D003568:Cytidine Monophosphate