title: Epidemiologic application of a standardized ribotype scheme for Vibrio cholerae O1.
abstract: A standardized scheme of 27 different BglI ribotypes and subtypes of Vibrio cholerae O1 strains is proposed on the basis of data from 214 human and environmental strains isolated in 35 countries and 14 U.S. states over the past 60 years. The ribotype patterns obtained are reproducible and stable over time. Seven different but very similar ribotypes (1a to 1g) were observed among 16 strains of the classical biotype. Twenty ribotypes and subtypes were identified among 198 V. cholerae O1 strains of the El Tor biotype. Six different patterns were found among the strains causing the current seventh pandemic. Strains of ribotype 8 originated only in central African countries, while those of ribotype 3 originated mainly in Asia and the Pacific Islands. The most widely distributed strains were those of ribotype 6, which was subdivided into three very similar but still distinguishable subtypes. The present Latin American epidemic is caused by strains of ribotype 5. Strains of this ribotype were isolated from several other geographic locations but can be differentiated from the Latin American strains by other molecular methods. Strains associated with two documented environmental reservoirs exhibited three distinct ribotype patterns; those isolated from patients who ate food from the U.S. Gulf waters were all of ribotype 2, while the strains related to the northeast Australian rivers were of ribotypes 9 and 10. Nontoxigenic V. cholerae O1 strains originating in Latin America and the U.S. Gulf Coast did not form a specific cluster of ribotypes. Ribotyping in combination with other well-defined methods can assist in epidemiologic investigations, helping to trace the movement of strains and to identify their geographic origins.
authors.affiliation: Foodborne and Diarrheal Diseases Branch, National Center for Infectious Diseases, Centers for Disease Control and Prevention, Atlanta, Georgia 30333.
authors.forename: T
authors.initials: T
authors.lastname: Popovic
authors.forename: C
authors.initials: C
authors.lastname: Bopp
authors.forename: O
authors.initials: O
authors.lastname: Olsvik
authors.forename: K
authors.initials: K
authors.lastname: Wachsmuth
mesh_terms: D000818:Animals; D015373:Bacterial Typing Techniques; D002771:Cholera / Q000453:epidemiology / Q000382:microbiology*; D015252:Deoxyribonucleases, Type II Site-Specific; D006801:Humans; D007843:Latin America / Q000453:epidemiology; D012150:Polymorphism, Restriction Fragment Length; D012329:RNA, Bacterial / Q000235:genetics*; D012335:RNA, Ribosomal / Q000235:genetics*; D014481:United States / Q000453:epidemiology; D014734:Vibrio cholerae / Q000145:classification* / Q000235:genetics / Q000472:pathogenicity
chemical_list: D012329:RNA, Bacterial; D012335:RNA, Ribosomal; D015252:Deoxyribonucleases, Type II Site-Specific; C018492:GCCNNNNNGGC-specific type II deoxyribonucleases