Cell cycle analysis by the relative movement approach: effect of variability across S-phase of DNA synthesis rate.
Cell populations pulse-labelled with BrdUrd, and sampled at increasing times after the pulse, yield DNA-BrdUrd distributions from which the relative movement (RM) and the depletion function (DF) of labelled, undivided cells can be calculated. In this paper we present an extension of the equation for the time course of RM, given by White and Meistrich (Cytometry 1986, 7, 486-490), to the case in which the rate of DNA synthesis changes across S-phase. Some modalities of cell loss were also considered. Computer simulations showed that different patterns of DNA synthesis rate across S-phase can result in appreciably different RM curves. An analytical expression of the RM curve, in which the variability across S-phase of the rate of DNA synthesis is accounted for by only one parameter, was proposed. This expression was used for the simultaneous fitting of time sequences of RM and DF data of U937 cells, in order to estimate the phase transit times TS and TG2+M, and the potential doubling time Tpot. The use of the extended model gave better results than those obtained under the assumption of constant rate of DNA synthesis across S-phase.
Bertuzzi
A
A
Istituto di Analisi dei Sistemi ed Informatica del CNR, Università di Roma La Sapienza, Italy.
Del Grosso
N
N
Gandolfi
A
A
Sinisgalli
C
C
Starace
G
G
D001973:Bromodeoxyuridine / Q000378:metabolism; D004247:DNA / Q000096:biosynthesis*; D005434:Flow Cytometry; D006801:Humans; D008954:Models, Biological; D016196:S Phase / Q000502:physiology*; D014407:Tumor Cells, Cultured
D004247:DNA; D001973:Bromodeoxyuridine