title: Serotyping of primary human immunodeficiency virus type 1 isolates from diverse geographic locations by flow cytometry.
abstract: The immunologic relatedness of the various human immunodeficiency virus type 1 (HIV-1) clades was determined with 13 human anti-HIV-1 monoclonal antibodies (MAbs) to six immunogenic regions of the HIV-1 structural proteins. The immunoreactivity of the native, oligomeric viral envelope glycoproteins expressed on the surfaces of human peripheral blood mononuclear cells infected in vitro with primary isolates from clades A through E was determined by flow cytometry. Some epitopes in the immunodominant region of gp41 and the C terminus of gp120 appear to be HIV-1 group specific in that they are expressed on the surfaces of cells in cultures infected with the majority of viruses tested from clades A to E. Epitopes within the V3 region appear to be clade restricted. Surprisingly, one MAb to an epitope in the C terminus of gp120 was entirely clade B specific. Staining with anti-V2 and anti-CD4 binding domain (CD4bd) reagents was infrequently detected. Anti-CD4bd MAbs stained only CD4-negative T cells because the CD4bd of gp120 appeared to be complexed with membrane CD4. When present, the epitopes of V2 and the CD4bd appeared to be expressed on cells infected with various clades. Thus, the results suggest that MAbs to gp41, the C terminus, and the V3 loop of gp120 are most useful in serotyping primary isolates of HIV-1, providing group-specific, clade-restricted, and clade-specific reagents. The use of the immunofluorescent method with the reagents described herein distinguishes infection with clade B from that with all other HIV-1 clades. With additional MAbs, this technique will allow a broadly applicable, reproducible, and practical method for serotyping HIV-1.
authors.affiliation: Veterans Affairs Medical Center, New York, New York 10010, USA.
authors.forename: S
authors.initials: S
authors.lastname: Zolla-Pazner
authors.forename: J
authors.initials: J
authors.lastname: O'Leary
authors.forename: S
authors.initials: S
authors.lastname: Burda
authors.forename: M K
authors.initials: MK
authors.lastname: Gorny
authors.forename: M
authors.initials: M
authors.lastname: Kim
authors.forename: J
authors.initials: J
authors.lastname: Mascola
authors.forename: F
authors.initials: F
authors.lastname: McCutchan
mesh_terms: D000595:Amino Acid Sequence; D015704:CD4 Antigens / Q000276:immunology; D002478:Cells, Cultured; D016000:Cluster Analysis; D005434:Flow Cytometry; D014644:Genetic Variation; D015497:HIV-1 / Q000145:classification* / Q000235:genetics; D006801:Humans; D008969:Molecular Sequence Data; D012703:Serotyping; D013045:Species Specificity
chemical_list: D015704:CD4 Antigens