title: A novel activity of OmpT. Proteolysis under extreme denaturing conditions.
abstract: A novel property of the bacterial outer membrane protein T, OmpT, has been discovered. It is active under extreme denaturing conditions. This finding emerged during characterization of a protease associated with the degradation of recombinant proteins expressed as inclusion bodies in Escherichia coli. These inclusion body proteins are stable to proteolytic degradation until they are solubilized by denaturation. The protease that degrades them under denaturing conditions was identified as OmpT on the basis of substrate specificity, inhibitor profile, and confirmation that its N-terminal sequence is identical with that of OmpT. A previously unknown property of this enzyme, OmpT's preference for denatured substrates, may provide a clue to its physiological function. To facilitate further characterization of this proteolytic activity, we have optimized a system to extract and assay OmpT under denaturing conditions using a soluble substrate, rabbit muscle creatine kinase.
authors.affiliation: Department of Pharmaceutical Chemistry, University of California, San Francisco 94143, USA.
authors.forename: C B
authors.initials: CB
authors.lastname: White
authors.forename: Q
authors.initials: Q
authors.lastname: Chen
authors.forename: G L
authors.initials: GL
authors.lastname: Kenyon
authors.forename: P C
authors.initials: PC
authors.lastname: Babbitt
mesh_terms: D000595:Amino Acid Sequence; D000818:Animals; D006868:Hydrolysis; D008969:Molecular Sequence Data; D009994:Osmolar Concentration; D011489:Protein Denaturation; D012697:Serine Endopeptidases / Q000737:chemistry / Q000378:metabolism*; D013379:Substrate Specificity; D014101:Torpedo
chemical_list: D012697:Serine Endopeptidases; C057840:omptin outer membrane protease