title: Interactions between aldehyde derivatives and the aldehyde binding site of bacterial luciferase.
abstract: The interaction of triazine aldehydes with the aldehyde binding site of bacterial luciferases was investigated using a series of triazine aldehydes with different aldehyde chain length, and substituents on the s-triazine ring. Substrate activity was determined using luciferase from Photobacterium fischeri and Vibrio harveyi in a dithionite-based luciferases assay. The chain length optimum was determined for two triazine aldehyde classes to be C-10 and C-11, respectively. Only the substrate activity of 10-(4-chloro-6-methylthio-s-triazine-2-yl)aminodecanal (5) was as high as n-decanal, the reference aldehyde. All other triazine derivatives reduced light emission, probably by hindered binding of the substrates. The degree of activity reduction correlated with the volume of the triazine ring moiety. The triazine moiety volume of compound 5 was estimated to be 200 x 10(-30) m3. Triazine aldehydes which showed reduced light emission had an estimated volume of 228 x 10(-30) m3 or greater. All triazine aldehydes showed approximately 10-fold lower activities for Vibrio harveyi than for Photobacterium fischeri luciferase. Substrate specificity was the same for both luciferases. A schematic superposition of quinone aldehydes and triazine aldehydes which showed substrate activities equivalent to n-decanal, indicated potential interaction sites of aldehyde substrates with the aldehyde binding site of bacterial luciferases. The in vivo relevance of the results is discussed.
authors.affiliation: GBF--Gesellschaft für Biotechnologische Forschung mbH, Project Group Biosensors, Braunschweig, Germany.
authors.forename: R
authors.initials: R
authors.lastname: Jockers
authors.forename: T
authors.initials: T
authors.lastname: Ziegler
authors.forename: R D
authors.initials: RD
authors.lastname: Schmid
mesh_terms: D000447:Aldehydes / Q000378:metabolism* / Q000494:pharmacology; D001665:Binding Sites; D008156:Luciferases / Q000037:antagonists & inhibitors / Q000378:metabolism*; D008163:Luminescent Measurements; D010776:Photobacterium / Q000201:enzymology*; D013329:Structure-Activity Relationship; D014227:Triazines / Q000138:chemical synthesis / Q000378:metabolism* / Q000494:pharmacology; D014733:Vibrio / Q000201:enzymology*
chemical_list: D000447:Aldehydes; D014227:Triazines; D008156:Luciferases