Monte Carlo track-structure calculations for aqueous solutions containing biomolecules.
Detailed Monte Carlo calculations provide a powerful tool for understanding mechanisms of radiation damage to biological molecules irradiated in aqueous solution. This paper describes the computer codes, OREC and RADLYS, which have been developed for this purpose over a number of years. Some results are given for calculations of the irradiation of pure water. Comparisons are presented between computations for liquid water and water vapor. Detailed calculations of the chemical yields of several products from X-irradiated, oxygen-free glycylglycine solutions have been performed as a function of solute concentration. Excellent agreement is obtained between calculated and measured yields. The Monte Carlo analysis provides a complete mechanistic picture of pathways to observed radiolytic products. This approach, successful with glycylglycine, will be extended to study the irradiation of oligonucleotides in aqueous solution.
Turner
J E
JE
Health Sciences Research Division, Oak Ridge National Laboratory, TN 37831, USA.
Hamm
R N
RN
Ritchie
R H
RH
Bolch
W E
WE
D000599:Amino Acids, Diamino; D000641:Ammonia; D001224:Aspartic Acid; D005998:Glycine / Q000031:analogs & derivatives; D006033:Glycylglycine / Q000737:chemistry*; D009010:Monte Carlo Method; D011830:Radiation Effects; D012984:Software; D012996:Solutions; D013386:Succinates; D019802:Succinic Acid; D014867:Water
D000599:Amino Acids, Diamino; D012996:Solutions; D013386:Succinates; D014867:Water; D006033:Glycylglycine; D001224:Aspartic Acid; D000641:Ammonia; C031934:diaminosuccinic acid; D019802:Succinic Acid; D005998:Glycine