Exploring the peptide 3(10)-helix reversible alpha-helix equilibrium with double label electron spin resonance.
Over the last several years we have used spin labeling as a means for exploring the structure of helical peptides. Two nitroxide labels are engineered into a peptide sequence and distances are ranked with electron spin resonance (ESR). We have found that there is a significant amount of 3(10)-helix in 16-residue model peptides containing only L-amino acids. This review covers several facets of the methodology including spin labeling strategy, interpretation of ESR spectra and the influence of molecular dynamics on the spectral line shapes. Also covered are recent findings of a length-dependent 3(10)-helix-->alpha-helix transition and the role of Arg+ in the stabilization of specific helix structures.
Fiori
W R
WR
Department of Chemistry and Biochemistry, University of California, Santa Cruz 95064, USA.
Millhauser
G L
GL
D000595:Amino Acid Sequence; D001120:Arginine / Q000737:chemistry; D003553:Cystine / Q000737:chemistry; D004578:Electron Spin Resonance Spectroscopy; D008969:Molecular Sequence Data; D015394:Molecular Structure; D010455:Peptides / Q000737:chemistry*; D017433:Protein Structure, Secondary; D013113:Spin Labels / Q000138:chemical synthesis
D010455:Peptides; D013113:Spin Labels; D003553:Cystine; D001120:Arginine