title: A topological model for the high-affinity nickel transporter of Alcaligenes eutrophus.
abstract: The gene hoxN of Alcaligenes eutrophus encodes a membrane protein with a molecular mass of 33.1 kDa that mediates energy-dependent uptake of nickel ions. Based on the hydrophobicity of the HoxN protein five, six, or seven transmembrane segments were predicted, depending on the algorithm used for computer analysis. To distinguish between these possibilities varying segments of the amino-terminal end of the transporter were fused to the Escherichia coli enzymes alkaline phosphatase (PhoA) or beta-galactosidase (LacZ). The enzymatic activity of 16 HoxN-PhoA and 15 HoxN-LacZ fusions was determined. On the assumption that PhoA fusions only exhibit high activity when fused to periplasmic domains of the target, while LacZ fusions are only active when oriented towards the cytoplasm, a two-dimensional model for the nickel transporter was developed. This model proposes that HoxN contains four periplasmic and four cytoplasmic regions, and seven transmembrane helices. The amino terminus is located in the cytoplasm, and the carboxyl terminus faces the periplasm.
authors.affiliation: Institut für Pflanzenphysiologie und Mikrobiologie, Freie Universität Berlin, Germany.
authors.forename: T
authors.initials: T
authors.lastname: Eitinger
authors.forename: B
authors.initials: B
authors.lastname: Friedrich
mesh_terms: D000421:Alcaligenes / Q000737:chemistry* / Q000235:genetics; D000469:Alkaline Phosphatase / Q000235:genetics; D000595:Amino Acid Sequence; D017920:Antiporters / Q000737:chemistry* / Q000235:genetics; D001426:Bacterial Proteins / Q000737:chemistry / Q000235:genetics; D001483:Base Sequence; D002352:Carrier Proteins / Q000737:chemistry* / Q000235:genetics; D002462:Cell Membrane / Q000737:chemistry; D003593:Cytoplasm / Q000737:chemistry; D008969:Molecular Sequence Data; D009532:Nickel / Q000378:metabolism*; D017433:Protein Structure, Secondary; D017434:Protein Structure, Tertiary; D011993:Recombinant Fusion Proteins / Q000737:chemistry; D001616:beta-Galactosidase / Q000235:genetics
chemical_list: D017920:Antiporters; D001426:Bacterial Proteins; D002352:Carrier Proteins; C089761:HoxN protein, bacteria; D011993:Recombinant Fusion Proteins; D009532:Nickel; D000469:Alkaline Phosphatase; D001616:beta-Galactosidase