title: Covalently bound pH-indicator dyes at selected extracellular or cytoplasmic sites in bacteriorhodopsin. 1. Proton migration along the surface of bacteriorhodopsin micelles and its delayed transfer from surface to bulk.
abstract: The kinetics of the light-induced release and uptake of protons was monitored with the optical pH-indicator fluorescein covalently bound to various sites on the extracellular and cytoplasmic surfaces of bacteriorhodopsin. Selective labeling was achieved by reacting (iodoacetamido)fluorescein with the single cysteine residues in bacteriorhodopsin introduced at the desired positions by site-directed mutagenesis. All measurements were performed with bacteriorhodopsin micelles in phospholipid/detergent mixtures in 150 mM KCl at 22 degrees C, pH 7.3. Neither the replacements by cysteine nor the subsequent labeling affected the absorption spectrum of bacteriorhodopsin and the rise times of the M intermediate. Only the decay of M was altered for some bacteriorhodopsin mutants with cysteine residues on the cytoplasmic side. The proton release time detected with fluorescein attached to the extracellular surface (the proton release side) at position 72 (in the loop connecting helices B and C) or 130 (DE loop) was 22 +/- 4 microseconds, clearly faster than that measured with pyranine in the aqueous bulk phase (125 +/- 10 microseconds for wild-type and all mutants studied). For bacteriorhodopsin mutants labeled at positions 35, 101, 160, 229, and 231 in the cytoplasmic loop region (the proton uptake side), the released proton was observed with a time of 61 +/- 4 microseconds. This was about 3-fold slower than the release time on the extracellular side, but still significantly faster than that measured with pyranine in the bulk phase. These results suggest that the released protons are retained on the micellar surface and move more rapidly along this surface to the cytoplasmic side than from the surface to the bulk medium.(ABSTRACT TRUNCATED AT 250 WORDS)
authors.affiliation: Department of Physics, Freie Universität Berlin, Germany.
authors.forename: P
authors.initials: P
authors.lastname: Scherrer
authors.forename: U
authors.initials: U
authors.lastname: Alexiev
authors.forename: T
authors.initials: T
authors.lastname: Marti
authors.forename: H G
authors.initials: HG
authors.lastname: Khorana
authors.forename: M P
authors.initials: MP
authors.lastname: Heyn
mesh_terms: D000595:Amino Acid Sequence; D001190:Arylsulfonates; D001436:Bacteriorhodopsins / Q000737:chemistry / Q000235:genetics / Q000378:metabolism*; D003545:Cysteine / Q000737:chemistry; D003593:Cytoplasm / Q000378:metabolism; D004926:Escherichia coli; D019793:Fluorescein; D005452:Fluoresceins / Q000737:chemistry; D007700:Kinetics; D008823:Micelles; D008969:Molecular Sequence Data; D016297:Mutagenesis, Site-Directed; D010782:Photolysis; D017433:Protein Structure, Secondary; D011522:Protons; D011994:Recombinant Proteins
chemical_list: D001190:Arylsulfonates; D005452:Fluoresceins; D008823:Micelles; D011522:Protons; D011994:Recombinant Proteins; D001436:Bacteriorhodopsins; C005047:pyranine; D003545:Cysteine; D019793:Fluorescein