title: The reduced stability of a plant alcohol dehydrogenase is due to the substitution of serine for a highly conserved phenylalanine residue.
abstract: The zinc-binding long-chain alcohol dehydrogenases from plants and animals exhibit a considerable level of amino acid sequence conservation. While the functional importance of many of the conserved residues is known, the role of others has not yet been determined. We have identified a naturally occurring Adh-1 allele in the legume Phaseolus acutifolius with several unusual characteristics. Individuals homozygous for this allele, Adh-1 CN, possess a single isozyme starch gel electrophoretic pattern suggestive of a null allele, and exhibit ADH enzyme activity levels ca. 60% lower than the standard wild-type Adh-1F line. Interestingly, analysis of Adh-1CN homozygotes on an alternative gel system indicates that Adh-1CN does encode a polypeptide capable of forming functional homo- and heterodimers. However, the levels of ADH activity displayed by these isozymes are far lower than those observed for the corresponding wild type ADH-1F isozymes. Dialysis experiments indicate that isozymes containing the ADH-1CN polypeptide are inactivated by slightly acidic conditions, which may explain the apparent null phenotype on starch gels. Elevated temperatures cause a similar loss of enzyme activity. The deduced amino acid sequences of ADH-1CN and ADH-1F were obtained from their corresponding cDNA clones, and the only significant difference detected between the two is a single amino acid replacement substitution. Residue 144 is occupied by phenylalanine in the ADH-1F polypeptide, whereas serine occupies this position in the ADH-1CN polypeptide. The proximity of residue 144 to the catalytic zinc in the substrate-binding pocket, coupled with the fact that it is integral to a defined hydrophobic core of the ADH polypeptide, may explain the observed disruptive effect that the serine substitution has on both the activity and stability of the ADH-1CN polypeptide. It also provides an explanation for the maintenance of phenylalanine or the structurally similar tyrosine at this residue in Zn-binding long-chain ADHs.
authors.affiliation: Department of Horticultural Sciences, Cornell University, New York State Agricultural Experiment Station, Geneva 14456.
authors.forename: D F
authors.initials: DF
authors.lastname: Garvin
authors.forename: N F
authors.initials: NF
authors.lastname: Weeden
authors.forename: J J
authors.initials: JJ
authors.lastname: Doyle
mesh_terms: D000426:Alcohol Dehydrogenase / Q000737:chemistry* / Q000235:genetics / Q000302:isolation & purification; D000483:Alleles; D000595:Amino Acid Sequence; D000818:Animals; D001483:Base Sequence; D017124:Conserved Sequence; D017931:DNA Primers; D018076:DNA, Complementary / Q000737:chemistry; D018744:DNA, Plant / Q000235:genetics; D004592:Electrophoresis, Starch Gel; D004795:Enzyme Stability; D007887:Fabaceae / Q000201:enzymology*; D017343:Genes, Plant; D006720:Homozygote; D007527:Isoenzymes / Q000737:chemistry* / Q000235:genetics / Q000302:isolation & purification; D046911:Macromolecular Substances; D008969:Molecular Sequence Data; D010649:Phenylalanine; D010946:Plants, Medicinal; D016133:Polymerase Chain Reaction; D017386:Sequence Homology, Amino Acid; D012694:Serine
chemical_list: D017931:DNA Primers; D018076:DNA, Complementary; D018744:DNA, Plant; D007527:Isoenzymes; D046911:Macromolecular Substances; D012694:Serine; D010649:Phenylalanine; D000426:Alcohol Dehydrogenase