The complex of human Gs protein with the beta 3 adrenergic receptor: a computer-aided molecular modeling study.
Three-dimensional (3D) models of the human Gs protein, the human beta 3 adrenergic receptor and their complex are constructed using computer-aided molecular modeling techniques. The structures of bacterial EF-tu 200 and bacteriorhodopsin were used as starting points for modeling the Gs protein and beta 3 receptor, respectively. Experimental data are used as constraints to guide the modeling. The resulting 3D structures of the Gs protein, the beta 3 receptor and their complex are in accord with the experimental data. It is found that the third intracellular loop of the beta 3 receptor as well as its C-terminus are involved in the binding. Various residues of N-terminus and C-terminus of the Gs protein also participate in the binding. The model of the complex suggests that the Gs protein binds to the beta 3 receptor in such a way that it will be placed in the interface of membrane and intracellular space. This orientation is supported by experimental data. It is concluded that the modeled structure of the complex of the alpha subunit of the human Gs protein and the beta 3 adrenergic receptor is in agreement with the experimental data and it can provide a basis for understanding the way these proteins interact.
Mahmoudian
M
M
Department of Pharmacology, University of Medical Science, Tehran, Iran.
D000595:Amino Acid Sequence; D003196:Computer Graphics; D019204:GTP-Binding Proteins / Q000737:chemistry* / Q000378:metabolism; D006153:Guanosine Diphosphate / Q000378:metabolism; D006801:Humans; D008958:Models, Molecular; D008969:Molecular Sequence Data; D011487:Protein Conformation; D017433:Protein Structure, Secondary; D011943:Receptors, Adrenergic, beta / Q000737:chemistry* / Q000378:metabolism; D017386:Sequence Homology, Amino Acid
D011943:Receptors, Adrenergic, beta; D006153:Guanosine Diphosphate; D019204:GTP-Binding Proteins