title: The dsg gene of Myxococcus xanthus encodes a protein similar to translation initiation factor IF3.
abstract: The dsg mutants of Myxococcus xanthus are defective in fruiting body development and sporulation, yet they grow normally. The deduced amino acid sequence of the dsg gene product is 50 and 51% identical to the amino acid sequence of translation initiation factor IF3 of both Escherichia coli and Bacillus stearothermophilus, respectively. However, the Dsg protein has a carboxy-terminal extension of 66 amino acids, which are absent from its E. coli and B. stearothermophilus homologs. The Shine-Dalgarno sequence GGAGG and 5 bases further upstream are identical in M. xanthus and several enteric bacteria, despite the wide phylogenetic gap between these species. The infC gene, which encodes IF3 in enteric bacteria, starts with the atypical translation initiation codon AUU, which is known to be important for regulating the cellular level of IF3 in E. coli. Translation of the Dsg protein overexpressed from the M. xanthus dsg gene in E. coli cells initiates at an AUC codon, an atypical initiation codon in the AUU class. The dsg mutants DK429 and DK439 carry the same missense mutation that changes Gly-134 to Glu in a region of amino acid identity.
authors.affiliation: Department of Biochemistry and Developmental Biology, Stanford University, California 94305.
authors.forename: Y L
authors.initials: YL
authors.lastname: Cheng
authors.forename: L V
authors.initials: LV
authors.lastname: Kalman
authors.forename: D
authors.initials: D
authors.lastname: Kaiser
mesh_terms: D000595:Amino Acid Sequence; D001426:Bacterial Proteins / Q000096:biosynthesis* / Q000235:genetics / Q000302:isolation & purification; D001483:Base Sequence; D003001:Cloning, Molecular; D004269:DNA, Bacterial / Q000302:isolation & purification / Q000378:metabolism; D004926:Escherichia coli / Q000235:genetics / Q000378:metabolism; D005798:Genes, Bacterial; D001411:Geobacillus stearothermophilus / Q000235:genetics / Q000378:metabolism; D008969:Molecular Sequence Data; D016941:Myxococcus xanthus / Q000235:genetics* / Q000378:metabolism; D010448:Peptide Initiation Factors / Q000096:biosynthesis* / Q000235:genetics; D010957:Plasmids; D039665:Prokaryotic Initiation Factor-3; D011994:Recombinant Proteins / Q000096:biosynthesis / Q000302:isolation & purification; D015183:Restriction Mapping; D017386:Sequence Homology, Amino Acid; D015534:Trans-Activators / Q000096:biosynthesis* / Q000235:genetics / Q000302:isolation & purification
chemical_list: D001426:Bacterial Proteins; D004269:DNA, Bacterial; C086035:Dsg protein, Myxococcus xanthus; D010448:Peptide Initiation Factors; D039665:Prokaryotic Initiation Factor-3; D011994:Recombinant Proteins; D015534:Trans-Activators