Conformational changes upon dissociation of a globular protein from pea: a Fourier transform infrared spectroscopy study.
Fourier transform infrared spectroscopy shows that the secondary structure of legumin, a globular protein from pea seeds, is composed of 41% beta-sheets and 16% alpha-helices and furthermore reveals the presence of beta-turns. The conformation prediction from the analysis of the amino-acid sequence of legumin using hydrophobic cluster analysis reveals that the C-terminal part of the alpha-polypeptide is devoid of defined secondary structures, whereas the beta-polypeptide is highly ordered. Comparison with analogous 11S globulins from other plant families indicates that ordered domains are highly preserved, phenomenon that may be associated with the similarity of the quaternary structure of these proteins. The results also reveal the presence of a large hypervariable region, located at the surface of the protein, that could be at the origin of the different functional properties of the 11S type globulins. The step-by-step destruction of the quaternary oligomeric structure of the native protein is accompanied by conformational changes that depend on the dissociation conditions. Whereas acylation leads to a decrease of the alpha-helix content by 10% at the expense of the beta-sheet content, addition of sodium perchlorate results in the conversion of 10% of the protein secondary structure from beta-sheet to unordered. These observations provide further evidence of the existence of different monomeric states that differ from their secondary structure and, therefore, exhibit different surface-active properties.
Subirade
M
M
Laboratoire de Biochemie et Technologie des Protéines, Institut National de la Recherche Agronomique, Nantes, France.
Gueguen
J
J
Pézolet
M
M
D000595:Amino Acid Sequence; D016000:Cluster Analysis; D007887:Fabaceae / Q000737:chemistry*; D005916:Globulins / Q000737:chemistry; D008969:Molecular Sequence Data; D010472:Perchlorates / Q000494:pharmacology; D010940:Plant Proteins / Q000737:chemistry* / Q000187:drug effects; D010946:Plants, Medicinal; D011487:Protein Conformation / Q000187:drug effects; D017433:Protein Structure, Secondary / Q000187:drug effects; D017670:Sodium Compounds / Q000494:pharmacology; D013055:Spectrophotometry, Infrared; D017550:Spectroscopy, Fourier Transform Infrared; D013386:Succinates / Q000737:chemistry; D019802:Succinic Acid; D000097793:Legumins
D005916:Globulins; D010472:Perchlorates; D010940:Plant Proteins; D017670:Sodium Compounds; D013386:Succinates; D019802:Succinic Acid; D000097793:Legumins; C031068:sodium perchlorate