title: Use of small fragment restriction endonuclease analysis (SF-REA) for epidemiological fingerprinting of Klebsiella oxytoca.
abstract: A group of infections caused by Klebsiella oxytoca was observed among preterm neonates in a neonatal intensive care unit (NICU) of a pediatric hospital in Osnabrück, Germany. The presence of unique antimicrobial susceptibility patterns among the bacterial isolates prompted an investigation to determine whether a limited spread of one single strain existed. All 4 K. oxytoca isolates from the NICU and, in addition, 50 epidemiologically non-related strains were fingerprinted by small fragment restriction endonuclease analysis (SF-REA). From an analysis of silver-strained EcoR I-generated restriction fragment patterns of whole-cell DNA in polyacrylamide gels, it was evident that the 4 NICU isolates were closely related, whereas all epidemiologically unrelated strains exhibited different patterns. From the results of this study, DNA fingerprinting by SF-REA is proposed as a useful tool for investigating the epidemiological relatedness of K. oxytoca strains of clinical and environmental origin.
authors.affiliation: Staatliches Medizinal-Untersuchungsamt Osnabrück, Germany.
authors.forename: R
authors.initials: R
authors.lastname: Haertl
authors.forename: G
authors.initials: G
authors.lastname: Bandlow
mesh_terms: D015373:Bacterial Typing Techniques; D016172:DNA Fingerprinting / Q000379:methods*; D004269:DNA, Bacterial / Q000235:genetics* / Q000378:metabolism; D015252:Deoxyribonucleases, Type II Site-Specific / Q000378:metabolism; D006801:Humans; D007709:Klebsiella / Q000145:classification / Q000235:genetics*; D007710:Klebsiella Infections / Q000453:epidemiology*; D000091402:Prohibitins; D015203:Reproducibility of Results; D012680:Sensitivity and Specificity
chemical_list: D004269:DNA, Bacterial; C000717331:PHB2 protein, human; D000091402:Prohibitins; D015252:Deoxyribonucleases, Type II Site-Specific