title: Detection of clonal T-cell populations in gastrointestinal lymphomas by analysis of cRNA conformational polymorphisms of rearranged T-cell-receptor-gamma genes.
abstract: Analysis of complementary RNA molecules of junctional regions of rearranged T-cell-receptor-gamma genes show a pattern of conformational polymorphisms which is specific for an individual lymphocytic clone. In a blinded study we analysed formalin-fixed, paraffin-embedded histological specimens from gastrointestinal lymphomas and control tissues (lymphomas: pleomorphic T-cell 10, anaplastic large cell [Ki1+] 9, centroblastic 5, immunocytoma 1, B-CLL 2, Hodgkin's 2, centroblastic-centrocytic 1, MALT [mucosa associated lymphoid tissue] 1, T-cell acute lymphoblastic leukaemia 1, non-lymphoid or polyclonal lymphoid tissues 5). Junctional regions of rearranged TCR-gamma genes were amplified by the polymerase chain reaction and the products were transcribed into cRNA. Conformational patterns of cRNA molecules were analysed by polyacrylamide gel electrophoresis. 13/20 T-lineage lymphomas and the T-cell acute lymphocytic leukaemia displayed a distinct cRNA band pattern, all B-lineage lymphomas and the non-lymphoid control tissues were negative. Only one case of nasopharyngeal (lymphoepithelial, Schmincke-Regaud) carcinoma showed a faint cRNA banding pattern. This novel and non-radioactive assay allows for the rapid detection and molecular characterization of clonal lymphoid populations in minute histological biopsy specimens.
authors.affiliation: Department of Internal Medicine A, University of Münster, Germany.
authors.forename: O M
authors.initials: OM
authors.lastname: Koch
authors.forename: M
authors.initials: M
authors.lastname: Probst
authors.forename: M
authors.initials: M
authors.lastname: Tiemann
authors.forename: I
authors.initials: I
authors.lastname: Jakob
authors.forename: M
authors.initials: M
authors.lastname: Volkenandt
authors.forename: R
authors.initials: R
authors.lastname: Wienecke
authors.forename: J
authors.initials: J
authors.lastname: Buer
authors.forename: J
authors.initials: J
authors.lastname: Atzpodien
authors.forename: H J
authors.initials: HJ
authors.lastname: Lenz
authors.forename: P V
authors.initials: PV
authors.lastname: Danenberg
mesh_terms: D001483:Base Sequence; D004591:Electrophoresis, Polyacrylamide Gel; D015334:Gene Rearrangement, gamma-Chain T-Cell Antigen Receptor; D006801:Humans; D008228:Lymphoma, Non-Hodgkin / Q000235:genetics*; D008969:Molecular Sequence Data; D014411:Neoplastic Stem Cells / Q000473:pathology; D016133:Polymerase Chain Reaction; D018075:RNA, Complementary / Q000032:analysis*; D012334:RNA, Neoplasm / Q000032:analysis; D013274:Stomach Neoplasms / Q000235:genetics*; D013601:T-Lymphocytes / Q000473:pathology*
chemical_list: D018075:RNA, Complementary; D012334:RNA, Neoplasm