A radiation hybrid map of the BRCA1 region of chromosome 17q12-q21.
The chromosomal region 17q12-q21 contains a gene (BRCA1) conferring susceptibility to early-onset familial breast and ovarian cancer. An 8000-rad radiation-reduced hybrid (RH) panel was constructed to provide a resource for long-range mapping of this region. A large fraction of the hybrids (approximately 90%) retained detectable human chromosome 17 sequences. The complete panel of 76 hybrids was scored for the presence or absence of 22 markers from this chromosomal region, including 14 cloned genes, seven microsatellite repeats, and one anonymous DNA segment. Statistical analysis of the marker retention data employing multipoint methods provided both comprehensive and framework maps of this chromosomal region, including distance estimates between adjacent markers. The comprehensive RH map includes 17 loci and spans 179 cRays(8000). Likelihood ratios of at least 1000:1 support the 10-locus framework order: cen-D17S250-ERBB2-(THRA1, TOP2A)-D17S855-PPY-D17S190-MTBT1-GP3A++ +-BTR-D17S588-tel. The order obtained from RH mapping, when used in conjunction with other methods, will be useful in linkage analysis of breast cancer families and will facilitate the development of a physical map of this region.
Abel
K J
KJ
University of Michigan, Department of Internal Medicine, Ann Arbor 48109.
Boehnke
M
M
Prahalad
M
M
Ho
P
P
Flejter
W L
WL
Watkins
M
M
VanderStoep
J
J
Chandrasekharappa
S C
SC
Collins
F S
FS
Glover
T W
TW
D001483:Base Sequence; D001943:Breast Neoplasms / Q000235:genetics*; D002874:Chromosome Mapping / Q000379:methods; D002886:Chromosomes, Human, Pair 17; D004247:DNA / Q000235:genetics; D017931:DNA Primers; D004276:DNA, Satellite / Q000235:genetics; D005260:Female; D005819:Genetic Markers; D006801:Humans; D006822:Hybrid Cells / Q000528:radiation effects; D017404:In Situ Hybridization, Fluorescence; D008969:Molecular Sequence Data; D009857:Oncogenes; D010051:Ovarian Neoplasms / Q000235:genetics*; D012091:Repetitive Sequences, Nucleic Acid
D017931:DNA Primers; D004276:DNA, Satellite; D005819:Genetic Markers; D004247:DNA