title: A human DNA segment encompassing leucine and methionine tRNA pseudogenes localized on chromosome 6.
abstract: A human genomic clone, designated LHtlm8, that strongly hybridized to a mammalian leucine tRNA(IAG) probe, was found to encompass a pair of tRNA pseudogenes that are transcribed in a homologous cell extract. A leucine tRNA(AAG) pseudogene (TRLP1) is 2.1-kb upstream and of opposite polarity to a methionine elongator tRNA(CAU) pseudogene (TRMEP1). TRLP1 has three nucleotide variations (97% identity) from its cognate leucine tRNA(IAG), while TRMEP1 has a 78% identity with its cognate tRNA. Similar to a number of other eukaryotic tRNA pseudogenes, presumptive precursor tRNA transcripts are generated from the two pseudogenes in vitro, but possibly due to their aberrant and unstable secondary and tertiary structures, no detectable mature tRNA products are observed. The two tRNA pseudogenes are encompassed within a 9.6-kb EcoRI fragment that has been assigned to the chromosomal locus, 6pter-q13, by Southern blot hybridization of human-rodent somatic cell hybrid DNAs with probes derived from the cloned tRNA pseudogenes and flanking sequences. A 4.4-kb EcoRI fragment also harbored in clone LHtlm8 was mapped to human chromosome 11, suggesting that the two EcoRI fragments were inadvertantly ligated together during construction of the genomic library.
authors.affiliation: Department of Biological Sciences, University of North Texas, Denton 76203.
authors.forename: I L
authors.initials: IL
authors.lastname: Pirtle
authors.forename: Y N
authors.initials: YN
authors.lastname: Chang
authors.forename: M M
authors.initials: MM
authors.lastname: Lee
authors.forename: H F
authors.initials: HF
authors.lastname: Yi
authors.forename: S Y
authors.initials: SY
authors.lastname: Wang
authors.forename: O W
authors.initials: OW
authors.lastname: McBride
authors.forename: R M
authors.initials: RM
authors.lastname: Pirtle
mesh_terms: D000818:Animals; D001483:Base Sequence; D002417:Cattle; D002874:Chromosome Mapping; D002896:Chromosomes, Human, Pair 6; D006224:Cricetinae; D015698:Genomic Library; D006801:Humans; D006822:Hybrid Cells; D008969:Molecular Sequence Data; D011544:Pseudogenes; D012356:RNA, Transfer, Leu / Q000235:genetics*; D012358:RNA, Transfer, Met / Q000235:genetics*; D017422:Sequence Analysis, DNA; D017386:Sequence Homology, Amino Acid; D014158:Transcription, Genetic
chemical_list: D012356:RNA, Transfer, Leu; D012358:RNA, Transfer, Met