title: The hmc operon of Desulfovibrio vulgaris subsp. vulgaris Hildenborough encodes a potential transmembrane redox protein complex.
abstract: The nucleotide sequence of the hmc operon from Desulfovibrio vulgaris subsp. vulgaris Hildenborough indicated the presence of eight open reading frames, encoding proteins Orf1 to Orf6, Rrf1, and Rrf2. Orf1 is the periplasmic, high-molecular-weight cytochrome (Hmc) containing 16 c-type hemes and described before (W. B. R. Pollock, M. Loutfi, M. Bruschi, B. J. Rapp-Giles, J. D. Wall, and G. Voordouw, J. Bacteriol. 173:220-228, 1991). Orf2 is a transmembrane redox protein with four iron-sulfur clusters, as indicated by its similarity to DmsB from Escherichia coli. Orf3, Orf4, and Orf5 are all highly hydrophobic, integral membrane proteins with similarities to subunits of NADH dehydrogenase or cytochrome c reductase. Orf6 is a cytoplasmic redox protein containing two iron-sulfur clusters, as indicated by its similarity to the ferredoxin domain of [Fe] hydrogenase from Desulfovibrio species. Rrf1 belongs to the family of response regulator proteins, while the function of Rrf2 cannot be derived from the gene sequence. The expression of individual genes in E. coli with the T7 system confirmed the open reading frames for Orf2, Orf6, and Rrf1. Deletion of 0.4 kb upstream from orf1 abolished the expression of Hmc in D. desulfuricans G200, indicating this region to contain the hmc operon promoter. The expression of two truncated hmc genes in D. desulfuricans G200 resulted in stable periplasmic c-type cytochromes, confirming the domain structure of Hmc. We propose that Hmc and Orf2 to Orf6 form a transmembrane protein complex that allows electron flow from the periplasmic hydrogenases to the cytoplasmic enzymes that catalyze the reduction of sulfate. The domain structure of Hmc may be required to allow interaction with multiple hydrogenases.
authors.affiliation: Department of Biological Sciences, University of Calgary, Alberta, Canada.
authors.forename: M
authors.initials: M
authors.lastname: Rossi
authors.forename: W B
authors.initials: WB
authors.lastname: Pollock
authors.forename: M W
authors.initials: MW
authors.lastname: Reij
authors.forename: R G
authors.initials: RG
authors.lastname: Keon
authors.forename: R
authors.initials: R
authors.lastname: Fu
authors.forename: G
authors.initials: G
authors.lastname: Voordouw
mesh_terms: D000595:Amino Acid Sequence; D001426:Bacterial Proteins / Q000235:genetics*; D001483:Base Sequence; D016969:Desulfovibrio vulgaris / Q000235:genetics*; D004579:Electron Transport / Q000235:genetics / Q000502:physiology; D015870:Gene Expression / Q000235:genetics / Q000502:physiology; D005798:Genes, Bacterial / Q000235:genetics* / Q000502:physiology; D008565:Membrane Proteins / Q000235:genetics*; D008969:Molecular Sequence Data; D016366:Open Reading Frames / Q000235:genetics* / Q000502:physiology; D009876:Operon / Q000235:genetics* / Q000502:physiology; D010084:Oxidation-Reduction
chemical_list: D001426:Bacterial Proteins; D008565:Membrane Proteins