title: The nucleotide sequence of the coat protein genes and 3' non-coding regions of two resistance-breaking tobamoviruses in pepper shows that they are different viruses.
abstract: The nucleotide sequence of the coat protein genes and 3' non-coding regions of two different resistance-breaking tobamoviruses in pepper have been determined. The deduced coat protein of an Italian isolate of pepper mild mottle virus (PMMV-I) consists of 156 amino acids and its 3' non-coding region is 198 nucleotides long. They have been found to be very similar in sequence and structure to those previously reported for a Spanish isolate (PMMV-S). In contrast, a Dutch isolate termed P 11 codes for a coat protein of 160 amino acids and its 3' non-coding region is 291 nucleotides long, which may have arisen by duplication. The nucleotide and the predicted coat protein amino acid sequence analysis show that this isolate should be considered as a new virus within the tobamovirus group. The term paprika mild mottle virus (PaMMV) is proposed.
authors.affiliation: U.E.I. Fitopatología, Centro de Investigaciones Biológicas, C.S.I.C., Madrid, Spain.
authors.forename: I
authors.initials: I
authors.lastname: García-Luque
authors.forename: M L
authors.initials: ML
authors.lastname: Ferrero
authors.forename: J M
authors.initials: JM
authors.lastname: Rodríquez
authors.forename: E
authors.initials: E
authors.lastname: Alonso
authors.forename: A
authors.initials: A
authors.lastname: de la Cruz
authors.forename: A I
authors.initials: AI
authors.lastname: Sanz
authors.forename: C
authors.initials: C
authors.lastname: Vaquero
authors.forename: M T
authors.initials: MT
authors.lastname: Serra
authors.forename: J R
authors.initials: JR
authors.lastname: Díaz-Ruíz
mesh_terms: D000595:Amino Acid Sequence; D001483:Base Sequence; D002213:Capsid / Q000145:classification / Q000235:genetics*; D003001:Cloning, Molecular; D004279:DNA, Viral; D005814:Genes, Viral; D007113:Immunity, Innate / Q000235:genetics; D007438:Introns; D008969:Molecular Sequence Data; D009690:Nucleic Acid Conformation; D010802:Phylogeny; D010935:Plant Diseases / Q000382:microbiology; D010942:Plant Viruses / Q000145:classification / Q000235:genetics*; D010944:Plants / Q000235:genetics / Q000276:immunology / Q000382:microbiology; D010947:Plants, Toxic; D012367:RNA, Viral / Q000737:chemistry / Q000235:genetics; D015183:Restriction Mapping; D017386:Sequence Homology, Amino Acid; D012689:Sequence Homology, Nucleic Acid; D014026:Nicotiana; D015678:Viral Structural Proteins / Q000235:genetics
chemical_list: D004279:DNA, Viral; D012367:RNA, Viral; D015678:Viral Structural Proteins