title: Human ERCC5 cDNA-cosmid complementation for excision repair and bipartite amino acid domains conserved with RAD proteins of Saccharomyces cerevisiae and Schizosaccharomyces pombe.
abstract: Several human genes related to DNA excision repair (ER) have been isolated via ER cross-species complementation (ERCC) of UV-sensitive CHO cells. We have now isolated and characterized cDNAs for the human ERCC5 gene that complement CHO UV135 cells. The ERCC5 mRNA size is about 4.6 kb. Our available cDNA clones are partial length, and no single clone was active for UV135 complementation. When cDNAs were mixed pairwise with a cosmid clone containing an overlapping 5'-end segment of the ERCC5 gene, DNA transfer produced UV-resistant colonies with 60 to 95% correction of UV resistance relative to either a genomic ERCC5 DNA transformant or the CHO AA8 progenitor cells. cDNA-cosmid transformants regained intermediate levels (20 to 45%) of ER-dependent reactivation of a UV-damaged pSVCATgpt reporter plasmid. Our evidence strongly implicates an in situ recombination mechanism in cDNA-cosmid complementation for ER. The complete deduced amino acid sequence of ERCC5 was reconstructed from several cDNA clones encoding a predicted protein of 1,186 amino acids. The ERCC5 protein has extensive sequence similarities, in bipartite domains A and B, to products of RAD repair genes of two yeasts, Saccharomyces cerevisiae RAD2 and Schizosaccharomyces pombe rad13. Sequence, structural, and functional data taken together indicate that ERCC5 and its relatives are probable functional homologs. A second locus represented by S. cerevisiae YKL510 and S. pombe rad2 genes is structurally distinct from the ERCC5 locus but retains vestigial A and B domain similarities. Our analyses suggest that ERCC5 is a nuclear-localized protein with one or more highly conserved helix-loop-helix segments within domains A and B.
authors.affiliation: Life Sciences Division, Los Alamos National Laboratory, New Mexico 87545.
authors.forename: M A
authors.initials: MA
authors.lastname: MacInnes
authors.forename: J A
authors.initials: JA
authors.lastname: Dickson
authors.forename: R R
authors.initials: RR
authors.lastname: Hernandez
authors.forename: D
authors.initials: D
authors.lastname: Learmonth
authors.forename: G Y
authors.initials: GY
authors.lastname: Lin
authors.forename: J S
authors.initials: JS
authors.lastname: Mudgett
authors.forename: M S
authors.initials: MS
authors.lastname: Park
authors.forename: S
authors.initials: S
authors.lastname: Schauer
authors.forename: R J
authors.initials: RJ
authors.lastname: Reynolds
authors.forename: G F
authors.initials: GF
authors.lastname: Strniste
mesh_terms: D000595:Amino Acid Sequence; D000818:Animals; D001483:Base Sequence; D016466:CHO Cells; D017124:Conserved Sequence; D003360:Cosmids; D006224:Cricetinae; D004247:DNA; D004260:DNA Repair / Q000235:genetics*; D004268:DNA-Binding Proteins / Q000235:genetics*; D004706:Endodeoxyribonucleases; D004720:Endonucleases; D005656:Fungal Proteins / Q000235:genetics*; D005816:Genetic Complementation Test; D006801:Humans; D008969:Molecular Sequence Data; D009687:Nuclear Proteins; D012441:Saccharomyces cerevisiae / Q000235:genetics*; D029701:Saccharomyces cerevisiae Proteins; D012568:Schizosaccharomyces / Q000235:genetics*; D017386:Sequence Homology, Amino Acid; D014157:Transcription Factors; D014170:Transformation, Genetic; D000099250:DNA Excision Repair Protein ERCC-5
chemical_list: D004247:DNA; D004268:DNA-Binding Proteins; D004706:Endodeoxyribonucleases; D004720:Endonucleases; D005656:Fungal Proteins; D009687:Nuclear Proteins; D029701:Saccharomyces cerevisiae Proteins; D014157:Transcription Factors; D000099250:DNA Excision Repair Protein ERCC-5; C073998:RAD2 protein, S cerevisiae