title: Regulation of the redox order of four hemes by pH in cytochrome c3 from D. vulgaris Miyazaki F.
abstract: The assignment of 1H-NMR signals of the heme methyl and propionate groups of cytochrome c3 of D. vulgaris Miyazaki F was performed. The heme assignment was revised for hemes 2 and 3 (sequential heme numbering). Namely, heme 4 is mainly reduced at first with hemes 1, 2 and 3 following it in this order. The p2H titration of heme methyl signals in four macroscopic oxidation states was performed in the p2H range of 5.2 to 9.0. While the heme methyl resonances in the fully oxidized state showed just small changes with p2H, most resonances in the intermediate oxidation states revealed clear p2H dependence. In particular, the methyl resonances of heme 1 shifted significantly in the acidic region. Then, the chemical shifts of beta-CH2 (next to the carboxyl group) of all propionate groups in the fully oxidized state were observed at various p2H in the range of 4.5 to 9.0. Only the propionate group at C-13 (IUPAC-IUB nomenclature) of heme 1 showed a clear change in this p2H range, its titration curve being similar to those of the methyl resonances of heme 1 in the intermediate oxidation states. pKa of the propionate group was 5.95 +/- 0.05. Analysis of the microscopic formal redox potentials was carried out for the observations at p2H 5.2, 7.1 and 9.0. The redox potentials of heme 1 showed the most remarkable p2H dependence, resulting in the change of the order of the redox potentials of four hemes. A significant change was also found in the interacting potential between hemes 1 and 2. In the light of the p2H-titration experiments, the propionate at C-13 of heme 1 was identified as the most plausible ionizable group responsible for the p2H dependence of microscopic redox potentials of heme 1 in the acidic region.
authors.affiliation: Faculty of Engineering, Yokohama National University, Japan.
authors.forename: J S
authors.initials: JS
authors.lastname: Park
authors.forename: T
authors.initials: T
authors.lastname: Ohmura
authors.forename: K
authors.initials: K
authors.lastname: Kano
authors.forename: T
authors.initials: T
authors.lastname: Sagara
authors.forename: K
authors.initials: K
authors.lastname: Niki
authors.forename: Y
authors.initials: Y
authors.lastname: Kyogoku
authors.forename: H
authors.initials: H
authors.lastname: Akutsu
mesh_terms: D003574:Cytochrome c Group / Q000737:chemistry* / Q000378:metabolism; D016969:Desulfovibrio vulgaris / Q000737:chemistry* / Q000378:metabolism; D004579:Electron Transport; D006418:Heme / Q000737:chemistry* / Q000378:metabolism; D006863:Hydrogen-Ion Concentration; D009682:Magnetic Resonance Spectroscopy; D015394:Molecular Structure; D010084:Oxidation-Reduction; D011422:Propionates / Q000737:chemistry; D011522:Protons
chemical_list: D003574:Cytochrome c Group; D011422:Propionates; D011522:Protons; D006418:Heme; C017165:cytochrome c(3)