The yeast transcription terminator for RNA polymerase I is designed to prevent polymerase slippage.
A transcription terminator for RNA polymerase I (polI) in the yeast, Saccharomyces cerevisiae, is composed of two essential elements, the 11bp binding site for Reb1p and an upstream T-rich element coding for the last 10-12 nucleotides of the terminated transcript. We now show that, if the upstream element is changed to homopolymer T residues, polI undergoes iterative slippage, long poly(U) tails are added to the transcript, and termination is impaired. Reinsertion of one or two non-T residues within a critical region prevents iterative slippage and reinstates termination. A survey of naturally occurring terminators reveals that many contain T-rich upstream regions with non-T residues situated appropriately to prevent slippage. We discuss the possibility that the first step in slippage, backward sliding of both the transcript and the catalytic center of the polymerase, may be an obligatory step in the normal termination process.
Jeong
S W
SW
Fred Hutchinson Cancer Research Center, Seattle, Washington 98109, USA.
Lang
W H
WH
Reeder
R H
RH
D000818:Animals; D001483:Base Sequence; D001665:Binding Sites; D004268:DNA-Binding Proteins / Q000378:metabolism*; D005656:Fungal Proteins / Q000378:metabolism; D051379:Mice; D008957:Models, Genetic; D008969:Molecular Sequence Data; D016296:Mutagenesis; D009690:Nucleic Acid Conformation; D011072:Poly U; D012318:RNA Polymerase I / Q000378:metabolism*; D012097:Repressor Proteins / Q000378:metabolism; D016914:Ribonuclease H; D012441:Saccharomyces cerevisiae / Q000235:genetics / Q000378:metabolism*; D029701:Saccharomyces cerevisiae Proteins; D012689:Sequence Homology, Nucleic Acid; D013698:Templates, Genetic; D013728:Terminator Regions, Genetic; D014157:Transcription Factors; D014158:Transcription, Genetic; D014544:Uridine Triphosphate / Q000378:metabolism; D014982:Xenopus laevis
D004268:DNA-Binding Proteins; D005656:Fungal Proteins; C065681:REB1 protein, S cerevisiae; D012097:Repressor Proteins; D029701:Saccharomyces cerevisiae Proteins; D014157:Transcription Factors; D011072:Poly U; D012318:RNA Polymerase I; D016914:Ribonuclease H; D014544:Uridine Triphosphate