title: Collagen/collagenase interaction: does the enzyme mimic the conformation of its own substrate?
abstract: In this report, we present a hypothesis on the mechanism used by interstitial collagenases to cleave their natural substrate, interstitial collagens. The hypothesis is based on the assumption that the proline hinge domain of interstitial collagenase adopts a collagen-like conformation. With a collagen-like domain, the enzyme is able to disturb the quaternary organization of the triple helix in the collagenase-susceptible site. A modeling analysis suggests that interaction between prolines of both collagen and collagenase forming a kind of "proline zipper" is involved in the destabilization step. This destabilization makes the three-collagen helix susceptible to the catalytic cleft of the catalytic core.
authors.affiliation: Ludwig Institute for Cancer Research, Sao Paulo Branch, Brasil.
authors.forename: S J
authors.initials: SJ
authors.lastname: De Souza
authors.forename: H M
authors.initials: HM
authors.lastname: Pereira
authors.forename: S
authors.initials: S
authors.lastname: Jacchieri
authors.forename: R R
authors.initials: RR
authors.lastname: Brentani
mesh_terms: D000595:Amino Acid Sequence; D000818:Animals; D003094:Collagen / Q000737:chemistry / Q000378:metabolism*; D017364:Collagenases / Q000737:chemistry / Q000378:metabolism*; D006801:Humans; D008958:Models, Molecular; D018716:Molecular Mimicry; D008969:Molecular Sequence Data; D013329:Structure-Activity Relationship; D013379:Substrate Specificity
chemical_list: D003094:Collagen; D017364:Collagenases