title: Non-stochastic utilization of Ig V region genes in unselected human peripheral B cells.
abstract: Limited evidence based on a few subjects suggests that human peripheral blood B cells may express a non-stochastic assortment of V region genes. To determine if non-stochastic utilization was a generally applicable rule, the identities of rearranged V region gene segments were determined in unselected peripheral blood B cells from 12 subjects (five male, seven female), ranging in age from 35 to 72 years. The analysis was limited to V region genes belonging to the VH3 gene family. More than 4500 independent VH3-containing rearrangements were analysed. The frequency of occurrence of eight individual VH3 gene segments contained in rearrangements was assessed using gene specific oligonucleotide probes. Usage of elements was not uniform. Three elements, which have been known to encode autoantibodies as well as to be frequently rearranged during fetal development, were represented among rearrangements more frequently than were other members of the VH3 family, and in aggregate, accounted for the majority of rearrangements. These three predominant loci are clustered in an 80 kb region suggesting an influence of chromosomal location on efficiency of rearrangement. The results document a clear, statistically significant, preference for the occurrence of specific V region genes among rearrangements. The modest amount of variation observed between subjects was not associated with either age or gender. Duplications which increased gene dose may have contributed to increased gene usage. These data indicate that, in caucasians, the immunoglobulin rearrangements in adult human B cells are dominated by a few heavy chain V region genes to the exclusion of other putatively equally functional genes. Thus, the conventional notion that the adult repertoire is normalized with respect to family complexity is not confirmed by analysis of individual VH genes.
authors.affiliation: Virginia Mason Research Center, Seattle, WA 98101, USA.
authors.forename: S C
authors.initials: SC
authors.lastname: Huang
authors.forename: R
authors.initials: R
authors.lastname: Jiang
authors.forename: A M
authors.initials: AM
authors.lastname: Glas
authors.forename: E C
authors.initials: EC
authors.lastname: Milner
mesh_terms: D000328:Adult; D000368:Aged; D000916:Antibody Diversity; D001402:B-Lymphocytes / Q000502:physiology*; D001483:Base Sequence; D017931:DNA Primers / Q000737:chemistry; D005260:Female; D015322:Gene Rearrangement, B-Lymphocyte; D005803:Genes, Immunoglobulin; D006801:Humans; D008297:Male; D008875:Middle Aged; D008969:Molecular Sequence Data; D013269:Stochastic Processes
chemical_list: D017931:DNA Primers