FastAlert--an automatic search system to alert about new entries in biological sequence databanks.
This paper describes a new tool enabling awareness of new sequence databank entries of interest. The FastAlert system relieves the researcher from the burden of repeating FASTA searches in order to keep up with the rapidly growing amount of information found in biological sequence databanks. The query sequence can be submitted from any computer connected to the Internet. Upon registration, the databank, including the updates, is scanned at periodic intervals with the sequence provided. The results, so-called FastAlert reports, are delivered via electronic mail. The reports contain the FASTA best-scores list and the similarity statistics for each entry listed.
Eggenberger
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Basel University, Biozentrum, Switzerland. florian.eggenberger@ubs.ch
Redaschi
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N
Doelz
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R
D000595:Amino Acid Sequence; D001483:Base Sequence; D003195:Computer Communication Networks; D003199:Computer Systems; D016208:Databases, Factual; D016247:Information Storage and Retrieval; D016415:Sequence Alignment / Q000379:methods* / Q000706:statistics & numerical data; D012984:Software; D012985:Software Design