title: The repB gene required for production of extracellular enzymes and fluorescent siderophores in Pseudomonas viridiflava is an analog of the gacA gene of Pseudomonas syringae.
abstract: Two genes, designated repA and repB, are involved in the regulation of the synthesis of extracellular pectate lyase, protease, and alginate in Pseudomonas viridiflava. The repA gene has been shown to encode a protein highly homologous to several bacterial sensors in the two-component regulator family including the LemA of Pseudomonas syringae. In this study, the repB locus, initially identified in a 6.3-kb EcoRI genomic fragment of P. viridiflava, was further characterized. Results obtained from restriction mapping, deletion subclonings, and mini-Mu-LacZ fusions indicated that the repB gene was contained within a 0.8-kb HindIII-PstI region. Sequence analysis of this repB region revealed the presence of an open reading frame, which was predicted to encode a protein similar or identical to the gacA response regulator found in P. syringae and Pseudomonas fluorescens. The repB gene of P. viridiflava also regulated the production of fluorescent siderophores, in addition to the aforementioned extracellular enzymes and alginate. The repB or gacA homologs were detected in the genomes of nine other strains of P. viridiflava, P. fluorescens, and P. syringae included in the study. The data presented here and earlier indicate that the repA/repB gene regulatory system of P. viridiflava is analogous to the lemA/gacA system of P. syringae and P. fluorescens.
authors: Eastern Regional Research Center, U.S. Department of Agriculture, Philadelphia, PA 19118, USA.
authors: C H
authors: CH
authors: Liao
authors: D E
authors: DE
authors: McCallus
authors: J M
authors: JM
authors: Wells
authors: S S
authors: SS
authors: Tzean
authors: G Y
authors: GY
authors: Kang
mesh_terms: D000464:Alginates / Q000378:metabolism; D000595:Amino Acid Sequence; D001426:Bacterial Proteins / Q000096:biosynthesis* / Q000235:genetics; D001483:Base Sequence; D003001:Cloning, Molecular; D010450:Endopeptidases / Q000096:biosynthesis; D015964:Gene Expression Regulation, Bacterial; D015971:Gene Expression Regulation, Enzymologic; D005798:Genes, Bacterial; D020723:Glucuronic Acid; D006603:Hexuronic Acids; D008969:Molecular Sequence Data; D010957:Plasmids; D011133:Polysaccharide-Lyases / Q000096:biosynthesis; D011549:Pseudomonas / Q000235:genetics* / Q000378:metabolism*; D011993:Recombinant Fusion Proteins / Q000096:biosynthesis; D012097:Repressor Proteins / Q000096:biosynthesis / Q000235:genetics; D015183:Restriction Mapping; D017262:Siderophores / Q000096:biosynthesis*; D013045:Species Specificity
chemical_list: D000464:Alginates; D001426:Bacterial Proteins; C091100:GacA protein, Bacteria; D006603:Hexuronic Acids; D011993:Recombinant Fusion Proteins; C048817:RepB protein, Bacteria; D012097:Repressor Proteins; D017262:Siderophores; D020723:Glucuronic Acid; D010450:Endopeptidases; D011133:Polysaccharide-Lyases; C023911:pectate lyase