title: Concentration dependence of the subunit association of oligomers and viruses and the modification of the latter by urea binding.
abstract: A theoretical model is presented that accounts for the facilitation of the pressure dissociation of R17 phage, and for the partial restoration of the concentration dependence of the dissociation, by the presence of subdenaturing concentrations of urea. As an indifferent osmolyte urea should promote the stability of the protein aggregates under pressure, and the decrease in pressure stability with urea concentration demonstrates that such indirect solvent effects are not significant for this case, and that the progressive destabilization is the result of direct protein-urea interactions. By acting as a "homogenizer" of the properties of the phage particles, urea addition converts the pressure-induced deterministic dissociation of the phage into a limited stochastic equilibrium. The model establishes the origin of the uniform progression from the stochastic equilibrium of dimers, to the temperature-dependent and partially concentration-dependent association of tetramers, to the fully deterministic equilibrium observed in many multimers and in the virus capsids.
authors.affiliation: Departamento de Bioquimica, Universidade Federal do Rio de Janeiro, Brazil.
authors.forename: G
authors.initials: G
authors.lastname: Weber
authors.forename: A T
authors.initials: AT
authors.lastname: Da Poian
authors.forename: J L
authors.initials: JL
authors.lastname: Silva
mesh_terms: D001435:Bacteriophages / Q000737:chemistry*; D055592:Biophysical Phenomena; D001703:Biophysics; D006874:Hydrostatic Pressure; D008954:Models, Biological; D011485:Protein Binding; D011487:Protein Conformation; D013269:Stochastic Processes; D013816:Thermodynamics; D014508:Urea; D014764:Viral Proteins / Q000737:chemistry
chemical_list: D014764:Viral Proteins; D014508:Urea