title: Typing of Legionella pneumophila serogroup 1 isolates by degenerate (D-)RAPD fingerprinting.
abstract: A new method to identify clonal strains of pathogenic bacteria has been developed recently in this laboratory. The method utilizes degenerate random amplified polymorphic DNA primers (D-RAPD) to amplify random fragments in crude bacterial lysates, generating reproducible DNA banding profiles or fingerprints. We use this method to type outbreak and non-outbreak isolates of Legionella pneumophila serogroup 1 from four hospitals near to, and affiliated with the University of Pittsburgh Medical Center. Patient isolates from a large outbreak, and nearly half of the contemporaneous environmental isolates showed the same DNA profile. Other isolates derived from non-outbreak patients showed easily distinguishable profiles. Other Legionella isolates collected between 1984 and 1994 were also analysed by this method. Our studies demonstrate that four strains were common among patient and environmental isolates at the four hospitals. These strains were also found to be different from a limited number of isolates from outside the Pittsburgh area. Because of its speed, simplicity and powerful discriminating ability, we believe that the D-RAPD approach provides epidemiologists and hospital infection control teams with a powerful tool in their efforts in analysing and terminating infection outbreaks.
authors.affiliation: Department of Pathology, University of Pittsburgh Medical Center, PA 15261, USA.
authors.forename: S
authors.initials: S
authors.lastname: Sakallah
authors.forename: W
authors.initials: W
authors.lastname: Pasculle
authors.forename: R
authors.initials: R
authors.lastname: Lanning
authors.forename: D
authors.initials: D
authors.lastname: McDevitt
authors.forename: D
authors.initials: D
authors.lastname: Cooper
mesh_terms: D015373:Bacterial Typing Techniques; D001483:Base Sequence; D003428:Cross Infection / Q000453:epidemiology / Q000382:microbiology*; D016172:DNA Fingerprinting; D004269:DNA, Bacterial / Q000032:analysis* / Q000235:genetics; D004196:Disease Outbreaks; D004866:Equipment Contamination; D006785:Hospitals, University; D006801:Humans; D016952:Legionella pneumophila / Q000145:classification* / Q000235:genetics / Q000302:isolation & purification; D007877:Legionnaires' Disease / Q000453:epidemiology / Q000382:microbiology*; D008284:Maintenance and Engineering, Hospital; D008969:Molecular Sequence Data; D009518:New York / Q000208:ethnology; D010414:Pennsylvania / Q000453:epidemiology; D019105:Random Amplified Polymorphic DNA Technique; D015203:Reproducibility of Results; D016037:Single-Blind Method; D013045:Species Specificity; D014871:Water Microbiology; D014881:Water Supply
chemical_list: D004269:DNA, Bacterial