title: Identification of cbbBc as an additional distal gene of the chromosomal cbb CO2 fixation operon from Ralstonia eutropha.
abstract: Ralstonia eutropha (formerly Alcaligenes eutrophus) strain H16 possesses two highly homologous cbb operons encoding most of the Calvin cycle enzymes. One copy of the operon is located on the chromosome, the other on the megaplasmid pHG1 of the organism. Sequence analysis of the region downstream of the presumptive 3'-terminal gene (cbbAc) of the chromosomal operon revealed the presence of an open reading frame comprising 2,274 bp. Evidence is presented that this open reading frame is an additional distal gene (designated cbbBc) of the operon. In contrast to the other genes of the operon, cbbBc is not duplicated in the plasmid-borne operon. The deduced amino acid sequence of the cbbBc product (757 residues, molecular mass 83.17 kDa) showed the highest similarity to the large catalytic subunits of various bacterial formate dehydrogenases (FDH), suggesting that cbbBc might represent a structural FDH gene of R. eutropha. However, the properties of a cbbBc mutant strain indicated that the potential gene product is not related to known FDH of the organism. Transcriptional analysis in the homologous host and heterologous expression in Escherichia coli demonstrated that cbbBc is an active gene, which apparently has no essential function in the autotrophic metabolism of R. eutropha. The gene is a novel member of cbb operons in autotrophic bacteria.
authors.affiliation: Institut für Mikrobiologie, Georg-August-Universität Göttingen, Grisebachstrasse 8, D-37077 Göttingen, Germany.
authors.forename: D
authors.initials: D
authors.lastname: Bömmer
authors.forename: J
authors.initials: J
authors.lastname: Schäferjohann
authors.forename: B
authors.initials: B
authors.lastname: Bowien
mesh_terms: D000421:Alcaligenes / Q000235:genetics*; D000595:Amino Acid Sequence; D001426:Bacterial Proteins / Q000737:chemistry; D001483:Base Sequence; D015152:Blotting, Northern; D002245:Carbon Dioxide / Q000378:metabolism*; D002875:Chromosomes / Q000235:genetics; D003001:Cloning, Molecular; D004926:Escherichia coli / Q000235:genetics; D005798:Genes, Bacterial / Q000235:genetics; D008969:Molecular Sequence Data; D016297:Mutagenesis, Site-Directed / Q000235:genetics; D009876:Operon / Q000235:genetics; D010427:Pentose Phosphate Pathway / Q000235:genetics / Q000502:physiology; D010957:Plasmids / Q000235:genetics; D011401:Promoter Regions, Genetic / Q000235:genetics; D016415:Sequence Alignment; D017421:Sequence Analysis; D014158:Transcription, Genetic / Q000235:genetics
chemical_list: D001426:Bacterial Proteins; D002245:Carbon Dioxide