title: Comparison of automated and manual analysis of interphase in situ hybridization signals in tissue sections and nuclear suspensions.
abstract: In this study we compared visual and automated analyses of interphase in situ hybridization (ISH) signals in five prostatic tumor specimens and one normal prostate sample, both in tissue sections and nuclear suspensions. The advantage of tissue sections is preservation of tissue morphology allowing precise analysis of tumor cells only. The advantage of nuclear suspensions is easier access to automated analysis, due to their disaggregated and dispersed cellular appearance. The samples were hybridized with probes for the (peri)centromeric regions of chromosome 1 and Y. The number of ISH signals per nucleus was counted both manually and automatically by means of a commercially available image analysis system. After image analysis the results were interactively corrected using a gallery display. The automatic and manual counts, before and after interactive correction, were then statistically evaluated. We found no significant differences in overall distributions between the automated and the manual counts, before as well as after correction. This was observed for both tissue sections and cellular suspensions. It is therefore concluded that automated analysis of ISH signals is feasible in both nuclear suspensions and in tissue sections, despite a low percentage of nuclei that could be measured on the latter.
authors.affiliation: Department of Pathology, Erasmus University Rotterdam, The Netherlands. krijtenburg@pa1.fgg.eur.nl
authors.forename: P J
authors.initials: PJ
authors.lastname: Krijtenburg
authors.forename: J C
authors.initials: JC
authors.lastname: Alers
authors.forename: F T
authors.initials: FT
authors.lastname: Bosman
authors.forename: H
authors.initials: H
authors.lastname: van Dekken
mesh_terms: D000230:Adenocarcinoma / Q000473:pathology*; D000328:Adult; D001331:Automation; D002467:Cell Nucleus / Q000648:ultrastructure*; D002503:Centromere / Q000648:ultrastructure; D002878:Chromosomes, Human, Pair 1 / Q000648:ultrastructure; D006801:Humans; D007091:Image Processing, Computer-Assisted / Q000295:instrumentation / Q000379:methods*; D017403:In Situ Hybridization; D007399:Interphase; D008297:Male; D011467:Prostate / Q000166:cytology*; D011471:Prostatic Neoplasms / Q000473:pathology*; D014998:Y Chromosome / Q000648:ultrastructure