Identification of new localized RNAs in the Xenopus oocyte by differential display PCR.
We have identified localized transcripts in full-grown Xenopus oocytes by differential display PCR. One clone, An4a, has two transcripts, which localize to the animal half of the stage VI oocyte. The transcripts are expressed throughout early development, with embryonic expression primarily in anterior neural tissues. An4a has a high degree of sequence identity to a human cDNA clone of unknown function. Another clone, the previously identified beta-transducin repeat containing protein (beta-TrCP), has three transcripts with a unique pattern of localization, one localized to the animal half and two localized primarily to the vegetal cortex. This cDNA has previously been shown to rescue a yeast cell division cycle mutant, raising the possibility that the different Xenopus transcripts are involved in animal and vegetal cell cycles. Embryonic expression is primarily in the cement gland. These new localized transcripts contribute to the general observation that the vegetal cortex, but not the animal cortex, is a specific site for RNA localization.
Hudson
J W
JW
Department of Zoology, University of Toronto, Ontario, Canada.
Alarcón
V B
VB
Elinson
R P
RP
D000595:Amino Acid Sequence; D000818:Animals; D001483:Base Sequence; D002454:Cell Differentiation; D004247:DNA; D005260:Female; D006801:Humans; D008969:Molecular Sequence Data; D009865:Oocytes; D016366:Open Reading Frames; D016133:Polymerase Chain Reaction; D012313:RNA / Q000378:metabolism*; D012689:Sequence Homology, Nucleic Acid; D015293:Transducin / Q000235:genetics; D014981:Xenopus / Q000196:embryology / Q000235:genetics* / Q000378:metabolism*
D012313:RNA; D004247:DNA; D015293:Transducin