title: Efficient epitope mapping by bacteriophage lambda surface display.
abstract: A bacteriophage lambda surface expression system, lambda foo, was used for epitope mapping of human galectin-3. We constructed random epitope and peptide libraries and compared their efficiencies in the mapping. The galectin-3 cDNA was randomly digested by DNase 1 to make random epitope libraries. The libraries were screened by affinity selection using a microtiter plate coated with monoclonal antibodies. Direct DNA sequencing of the selected clones defined two distinct epitope sites consisting of nine and 11 amino-acid residues. Affinity selection of random peptide libraries recovered a number of sequences that were similar to each other but distinct from the galectin-3 sequence. These results demonstrate that a single affinity selection of epitope libraries with antibodies is able to define an epitope determinant as small as nine residues long and is more efficient in epitope mapping than random peptide libraries.
authors.affiliation: Department of Cell Biology, Scripps Research Institute, La Jolla, CA 92037, USA. ichi@scripps.edu
authors.forename: I
authors.initials: I
authors.lastname: Kuwabara
authors.forename: H
authors.initials: H
authors.lastname: Maruyama
authors.forename: Y G
authors.initials: YG
authors.lastname: Mikawa
authors.forename: R I
authors.initials: RI
authors.lastname: Zuberi
authors.forename: F T
authors.initials: FT
authors.lastname: Liu
authors.forename: I N
authors.initials: IN
authors.lastname: Maruyama
mesh_terms: D000595:Amino Acid Sequence; D000943:Antigens, Differentiation / Q000235:genetics / Q000276:immunology*; D010582:Bacteriophage lambda / Q000235:genetics* / Q000276:immunology; D003001:Cloning, Molecular / Q000379:methods; D018076:DNA, Complementary / Q000378:metabolism; D003850:Deoxyribonuclease I / Q000378:metabolism; D018604:Epitope Mapping / Q000379:methods*; D037502:Galectin 3; D015723:Gene Library; D006801:Humans; D008969:Molecular Sequence Data; D010455:Peptides / Q000737:chemistry / Q000235:genetics / Q000276:immunology; D010957:Plasmids / Q000235:genetics / Q000378:metabolism; D017422:Sequence Analysis, DNA
chemical_list: D000943:Antigens, Differentiation; D018076:DNA, Complementary; D037502:Galectin 3; D010455:Peptides; D003850:Deoxyribonuclease I