title: The influence of genotype and environment on the physiological and metabolic diversity of Fusarium compactum.
abstract: Fungal species produce a large variety of secondary metabolites which are of considerable interest to the pharmaceutical industry. It is clear that the secondary metabolite production of a species varies significantly in strains from different geographic locations and from different habitats. The influence of genotype and environment on metabolite production is, however, poorly understood. In this study we examined the influence of genotypic variability, physiological variability, environmental location, and habitat on metabolite production by Fusarium compactum. Isolates of the fungus from two geographic locations and two distinct habitat types were examined for growth on 95 different carbon sources, and genotypic variability was determined using RAPDs and rDNA-RFLP analysis. In a blind test secondary metabolite production was assessed using HPLC profiles of methanolic cell extracts. A number of correlations were observed between genotypic groupings, as determined using parsimony, and specific metabolic production. Similar correlations were also observed with physiological groups although genotypic analysis proved to be a more sensitive predictor of metabolite variability. The data suggest a complex relationship between environment, genotype, and metabolite production but highlight the use of genetic screening as a means of optimizing the changes of identifying a wide range of metabolites from a given species.
authors.affiliation: Department of Biological Sciences, University of Exeter, Washington Singer Laboratories, United Kingdom.
authors.forename: N J
authors.initials: NJ
authors.lastname: Talbot
authors.forename: P
authors.initials: P
authors.lastname: Vincent
authors.forename: H G
authors.initials: HG
authors.lastname: Wildman
mesh_terms: D001483:Base Sequence; D017931:DNA Primers; D004271:DNA, Fungal / Q000235:genetics / Q000302:isolation & purification; D005670:Fusarium / Q000235:genetics / Q000378:metabolism / Q000502:physiology*; D005838:Genotype; D010802:Phylogeny; D019105:Random Amplified Polymorphic DNA Technique
chemical_list: D017931:DNA Primers; D004271:DNA, Fungal