BBReader: a computer program for the combined use of the BioMagResBank and PDB databases.
A computer program ('BBReader') was developed which performs an inverse search in the BioMagResBank database. Given (cross) peak positions of a protein, the program searches for atoms with matching chemical shifts and suggests possible assignments for user-specified homo- and heteronuclear one- to three-dimensional COSY- and NOESY-type experiments. It can handle 1H, 13C and 15N spectra. Distance information from PDB files can be utilized for filtering possible NOESY cross peak assignments.
Wimmer
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R
MR Center, SINTEF-UNIMED, Trondheim, Norway.
Müller
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N
Petersen
S B
SB
D016208:Databases, Factual; D009682:Magnetic Resonance Spectroscopy; D011506:Proteins / Q000737:chemistry*; D012984:Software
D011506:Proteins