title: Comparison of ribotyping and randomly amplified polymorphic DNA PCR for characterization of Vibrio vulnificus.
abstract: A total of 85 isolates of Vibrio vulnificus were characterized by ribotyping with a probe complementary to 16S and 23S rRNA of Escherichia coli and by randomly amplified polymorphic DNA-PCR (RAPD-PCR) with a 10-mer oligonucleotide primer. The RAPD-PCR results were scanned, and the images were analyzed with a computer program. Ribotype membranes were evaluated visually. Both the ribotyping and the RAPD-PCR results showed that the collection of strains was genetically very heterogeneous. Ribotyping enabled us to differentiate U.S. and Danish strains and V. vulnificus biotypes 1 and 2, while the RAPD-PCR technique was not able to correlate isolates with sources or to differentiate the two biotypes, suggesting that ribotyping is useful for typing V. vulnificus strains whereas RAPD-PCR profiles may subdivide ribotypes. Two Danish clinical biotype 2 strains isolated from fishermen who contracted the infection cleaning eels belonged to the same ribotype as three eel strains (biotype 2), providing further evidence that V. vulnificus biotype 2 is an opportunistic pathogen for humans. One isolate (biotype 2) from Danish coastal waters also showed the same ribotype as the eel strains. This is, to our knowledge, the first time the isolation of V. vulnificus biotype 2 from coastal waters has been described.
authors.affiliation: Department of Veterinary Microbiology, Royal Veterinary and Agricultural University, Frederiksberg C, Denmark.
authors.forename: L
authors.initials: L
authors.lastname: Høi
authors.forename: A
authors.initials: A
authors.lastname: Dalsgaard
authors.forename: J L
authors.initials: JL
authors.lastname: Larsen
authors.forename: J M
authors.initials: JM
authors.lastname: Warner
authors.forename: J D
authors.initials: JD
authors.lastname: Oliver
mesh_terms: D000818:Animals; D015373:Bacterial Typing Techniques; D015342:DNA Probes / Q000235:genetics; D004524:Eels / Q000382:microbiology; D001330:Electronic Data Processing; D004926:Escherichia coli / Q000235:genetics; D006801:Humans; D012336:RNA, Ribosomal, 16S / Q000235:genetics*; D012338:RNA, Ribosomal, 23S / Q000235:genetics*; D019105:Random Amplified Polymorphic DNA Technique; D014733:Vibrio / Q000145:classification* / Q000235:genetics*; D014735:Vibrio Infections / Q000382:microbiology
chemical_list: D015342:DNA Probes; D012336:RNA, Ribosomal, 16S; D012338:RNA, Ribosomal, 23S