Repetitive sequences found in the chromosome of the myxobacterium Nannocystis exedens are similar to msDNA: a possible retrotransposition event in bacteria.
The first reverse transcriptase (RT) to be found in a prokaryotic cell is encoded by an element called a retron which resides in the chromosome of many different bacteria. In addition, all retrons code for a functionally obscure RNA-DNA satellite molecule called msDNA. msDNA is synthesized from an RNA template by the retron-encoded RT. An unusual retron element is described here from the myxobacterium Nannocystis exedens. This retron does not appear to have a typical RT gene in close proximity (1 kb) to the gene msd (which encodes the DNA strand of msDNA). The gene msr (which encodes the RNA strand of msDNA) appears to be duplicated and flanks both sides of the msd gene. Also discovered throughout the chromosome of this bacterium is a set of repeated sequences related to msDNA. These repeat sequences match only part of the sequences of msDNA and may have become incorporated into the chromosome of this bacterium by reverse transcription.
Lampson
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Department of Microbiology, University of Tennessee, Knoxville 37996-0845, USA.
Rice
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D001483:Base Sequence; D002876:Chromosomes, Bacterial / Q000235:genetics; D003001:Cloning, Molecular; D004277:DNA, Single-Stranded / Q000737:chemistry / Q000235:genetics*; D008969:Molecular Sequence Data; D005810:Multigene Family; D009231:Myxococcales / Q000235:genetics*; D009690:Nucleic Acid Conformation; D009693:Nucleic Acid Hybridization; D012329:RNA, Bacterial / Q000737:chemistry / Q000235:genetics*; D012091:Repetitive Sequences, Nucleic Acid; D018626:Retroelements; D012689:Sequence Homology, Nucleic Acid; D014158:Transcription, Genetic
D004277:DNA, Single-Stranded; D012329:RNA, Bacterial; D018626:Retroelements; C058681:msDNA