A single-tube PCR test for the diagnosis of Angelman and Prader-Willi syndrome based on allelic methylation differences at the SNRPN locus.
The analysis of allelic methylation differences in 15q11-q13 has been established as a valid test for the Angelman and Prader-Willi syndromes. Current tests use methylation-sensitive restriction enzymes and Southern blot analysis. Here we describe a single-tube PCR test. It is based on sodium bisulfite treatment of DNA, which converts unmethylated, but not methylated cytosine residues to uracil, and PCR primers specific for the maternal and the paternal allele. The method was validated in a blinded retrospective study on 87 DNA samples from normal controls and patients. Prospective studies by independent laboratories will be needed before this assay can replace Southern blot analysis in routine diagnostic procedures.
Zeschnigk
M
M
Institut für Genetik, Universität zu Köln, Deutschland.
Lich
C
C
Buiting
K
K
Doerfler
W
W
Horsthemke
B
B
D000483:Alleles; D017204:Angelman Syndrome / Q000175:diagnosis / Q000235:genetics*; D001324:Autoantigens; D002884:Chromosomes, Human, Pair 15; D004247:DNA / Q000032:analysis; D019175:DNA Methylation; D017931:DNA Primers; D018392:Genomic Imprinting; D006801:Humans; D016133:Polymerase Chain Reaction / Q000379:methods*; D011218:Prader-Willi Syndrome / Q000175:diagnosis / Q000235:genetics*; D012189:Retrospective Studies; D017411:Ribonucleoproteins, Small Nuclear; D013447:Sulfites; D055517:snRNP Core Proteins
D001324:Autoantigens; D017931:DNA Primers; D017411:Ribonucleoproteins, Small Nuclear; C526417:SNRPN protein, human; D013447:Sulfites; D055517:snRNP Core Proteins; D004247:DNA; C009279:sodium bisulfite