title: Cucumber chloroplast trnL(CAA) gene: nucleotide sequence and in vivo expression analysis in etiolated cucumber seedlings treated with benzyladenine and light.
abstract: The nucleotide sequence of a 714 bp BamHI-EcoRI fragment of cucumber chloroplast DNA was determined. The fragment contained a gene for tRNA(Leu) together with its flanking regions. The trnL(CAA) gene sequence is about 99% in similarity to broad bean, cauliflower, maize, spinach and tobacco corresponding genes. The relative expression level of the gene was determined by Northern (tRNA) gel blot and Northern (total cellular RNA) slot-blot analyses using the trnL gene probe in 6-day old etiolated cucumber seedlings and the seedlings that had been kept in the dark (dark-grown), treated with benzyladenine (BA) and kept in the dark (BA-treated dark-grown), illuminated (light-grown), and treated with BA and illuminated (BA-treated light-grown), for additional 4, 8 or 12 hr. The trnL transcripts and tRNA(Leu) levels in BA-treated dark-grown seedlings were 5 and 3 times higher, respectively after 4 hr BA treatment, while in the BA treated light-grown seedlings the level of trnL transcripts was only 3 times higher and had no detectable effect on mature tRNA(Leu) when compared to the time-4 hr dark-grown seedlings. However, the level of mature tRNA(Leu) did not show marked changes in the light-grown seedlings, whereas the level of trnL transcripts increases 3 times after 8 hr illumination of dark-grown seedlings. These data indicate that both light and cytokinin can signal changes in plastid tRNA gene expression. The possible regulatory mechanisms for such changes are discussed.
authors.affiliation: Department of Biochemistry, Indian Institute of Science, Bangalore, India.
authors.forename: S
authors.initials: S
authors.lastname: Hande
authors.forename: M V
authors.initials: MV
authors.lastname: Sreenagesh
authors.forename: C
authors.initials: C
authors.lastname: Jayabaskaran
mesh_terms: D001483:Base Sequence; D001596:Benzylamines / Q000494:pharmacology; D015152:Blotting, Northern; D003001:Cloning, Molecular; D018553:Cucumis sativus / Q000235:genetics*; D018742:DNA, Chloroplast / Q000737:chemistry / Q000235:genetics*; D018744:DNA, Plant / Q000737:chemistry; D018506:Gene Expression Regulation, Plant / Q000235:genetics; D017343:Genes, Plant; D008027:Light; D008969:Molecular Sequence Data; D009690:Nucleic Acid Conformation; D012356:RNA, Transfer, Leu / Q000737:chemistry / Q000235:genetics* / Q000378:metabolism
chemical_list: D001596:Benzylamines; D018742:DNA, Chloroplast; D018744:DNA, Plant; D012356:RNA, Transfer, Leu; C030796:benzylamine