Analysis of expressed sequence tags (ESTs) of the parasitic protozoa Entamoeba histolytica.
A directional cDNA library constructed from mRNA of the trophozoite of Entamoeba histolytica HM-1:IMSS strain was used for the generation of expressed sequence tags (ESTs). From 5' ends of the distinct cDNA clones, 105 ESTs were obtained. Of these, 30 clones (29%) were previously known E. histolytica genes. Forty-five clones (42%) had matches with entries for other organisms in the databases. These new E. histolytica genes constituted a broad range of transcripts distributed among cytoplasmic structural and regulatory proteins, enzymes, nuclear and other proteins, and proteins of unknown function. Thirty clones (29%) had no significant database matches and thus potentially represent E. histolytica-specific genes. These data of E. histolytica genes identified by nucleotide sequencing indicate the value of the adoption of genome sequencing strategies for the rapid increase in knowledge of organisms causing dysentery and liver abscess.
Tanaka
T
T
Division of Host Defense Mechanism, Tokai University School of Medicine, Isehara, Kanagawa, Japan. ttanaka@is.icc.u-tokai.ac.jp
Tanaka
M
M
Mitsui
Y
Y
D000818:Animals; D003001:Cloning, Molecular; D018076:DNA, Complementary / Q000737:chemistry*; D016054:DNA, Protozoan / Q000737:chemistry*; D004748:Entamoeba histolytica / Q000737:chemistry / Q000201:enzymology / Q000235:genetics*; D015723:Gene Library; D008969:Molecular Sequence Data; D009687:Nuclear Proteins / Q000235:genetics; D011506:Proteins / Q000235:genetics; D012333:RNA, Messenger / Q000032:analysis / Q000737:chemistry; D017422:Sequence Analysis, DNA; D017385:Sequence Homology
D018076:DNA, Complementary; D016054:DNA, Protozoan; D009687:Nuclear Proteins; D011506:Proteins; D012333:RNA, Messenger